Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HPS1Q92902 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.94■□□□□ 0.3
HPS1Q92902 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.94■□□□□ 0.3
HPS1Q92902 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.94■□□□□ 0.3
HPS1Q92902 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.94■□□□□ 0.3
HPS1Q92902 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.94■□□□□ 0.3
HPS1Q92902 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HPS1Q92902 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.94■□□□□ 0.3
HPS1Q92902 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 AL031963.3-201ENST00000606441 850 ntBASIC16.94■□□□□ 0.3
HPS1Q92902 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
HPS1Q92902 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HPS1Q92902 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 AL031598.1-201ENST00000561511 1773 ntBASIC16.94■□□□□ 0.3
HPS1Q92902 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.94■□□□□ 0.3
HPS1Q92902 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HPS1Q92902 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HPS1Q92902 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HPS1Q92902 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HPS1Q92902 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.94■□□□□ 0.3
HPS1Q92902 AL161938.1-201ENST00000569833 2180 ntBASIC16.94■□□□□ 0.3
HPS1Q92902 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.93■□□□□ 0.3
HPS1Q92902 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HPS1Q92902 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HPS1Q92902 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
HPS1Q92902 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HPS1Q92902 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS1Q92902 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HPS1Q92902 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.93■□□□□ 0.3
HPS1Q92902 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HPS1Q92902 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.93■□□□□ 0.3
HPS1Q92902 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HPS1Q92902 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 AC005829.2-201ENST00000571422 1056 ntBASIC16.93■□□□□ 0.3
HPS1Q92902 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HPS1Q92902 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS1Q92902 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.93■□□□□ 0.3
HPS1Q92902 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
HPS1Q92902 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.93■□□□□ 0.3
HPS1Q92902 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.93■□□□□ 0.3
HPS1Q92902 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HPS1Q92902 AL513477.1-201ENST00000602865 2407 ntBASIC16.92■□□□□ 0.3
HPS1Q92902 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS1Q92902 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.92■□□□□ 0.3
HPS1Q92902 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.92■□□□□ 0.3
HPS1Q92902 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS1Q92902 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS1Q92902 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS1Q92902 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HPS1Q92902 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HPS1Q92902 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS1Q92902 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS1Q92902 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS1Q92902 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS1Q92902 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.92■□□□□ 0.3
HPS1Q92902 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.92■□□□□ 0.3
HPS1Q92902 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.92■□□□□ 0.3
HPS1Q92902 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS1Q92902 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS1Q92902 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HPS1Q92902 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS1Q92902 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS1Q92902 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HPS1Q92902 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.92■□□□□ 0.3
HPS1Q92902 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS1Q92902 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HPS1Q92902 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms