Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP6NLQ92738 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP6NLQ92738 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP6NLQ92738 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
USP6NLQ92738 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
USP6NLQ92738 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.97■□□□□ 0.95
USP6NLQ92738 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6NLQ92738 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.96■□□□□ 0.95
USP6NLQ92738 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
USP6NLQ92738 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6NLQ92738 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6NLQ92738 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6NLQ92738 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6NLQ92738 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6NLQ92738 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6NLQ92738 AC009065.1-201ENST00000564055 1225 ntBASIC20.96■□□□□ 0.95
USP6NLQ92738 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.96■□□□□ 0.95
USP6NLQ92738 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.96■□□□□ 0.95
USP6NLQ92738 AL591684.3-201ENST00000605187 298 ntBASIC20.96■□□□□ 0.95
USP6NLQ92738 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6NLQ92738 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.96■□□□□ 0.95
USP6NLQ92738 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6NLQ92738 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6NLQ92738 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6NLQ92738 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6NLQ92738 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
USP6NLQ92738 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.96■□□□□ 0.95
USP6NLQ92738 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.96■□□□□ 0.95
USP6NLQ92738 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
USP6NLQ92738 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
USP6NLQ92738 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
USP6NLQ92738 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP6NLQ92738 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP6NLQ92738 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP6NLQ92738 KRT18P13-201ENST00000400056 1290 ntBASIC20.95■□□□□ 0.94
USP6NLQ92738 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP6NLQ92738 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.95■□□□□ 0.94
USP6NLQ92738 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.95■□□□□ 0.94
USP6NLQ92738 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.95■□□□□ 0.94
USP6NLQ92738 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.95■□□□□ 0.94
USP6NLQ92738 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.95■□□□□ 0.94
USP6NLQ92738 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.95■□□□□ 0.94
USP6NLQ92738 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
USP6NLQ92738 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP6NLQ92738 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP6NLQ92738 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
USP6NLQ92738 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
USP6NLQ92738 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.94■□□□□ 0.94
USP6NLQ92738 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6NLQ92738 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6NLQ92738 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
USP6NLQ92738 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6NLQ92738 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
USP6NLQ92738 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6NLQ92738 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
USP6NLQ92738 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.94■□□□□ 0.94
USP6NLQ92738 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
USP6NLQ92738 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6NLQ92738 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.94■□□□□ 0.94
USP6NLQ92738 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6NLQ92738 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6NLQ92738 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6NLQ92738 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.94■□□□□ 0.94
USP6NLQ92738 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
USP6NLQ92738 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.94■□□□□ 0.94
USP6NLQ92738 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.94■□□□□ 0.94
USP6NLQ92738 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6NLQ92738 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
USP6NLQ92738 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.94■□□□□ 0.94
USP6NLQ92738 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.94■□□□□ 0.94
USP6NLQ92738 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.94■□□□□ 0.94
USP6NLQ92738 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
USP6NLQ92738 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.94■□□□□ 0.94
USP6NLQ92738 AC243591.1-201ENST00000452967 1364 ntBASIC20.94■□□□□ 0.94
USP6NLQ92738 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
USP6NLQ92738 KRT8P50-201ENST00000562022 1438 ntBASIC20.94■□□□□ 0.94
USP6NLQ92738 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP6NLQ92738 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP6NLQ92738 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.93■□□□□ 0.94
USP6NLQ92738 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.93■□□□□ 0.94
USP6NLQ92738 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP6NLQ92738 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP6NLQ92738 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.93■□□□□ 0.94
USP6NLQ92738 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP6NLQ92738 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.93■□□□□ 0.94
USP6NLQ92738 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
USP6NLQ92738 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
USP6NLQ92738 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.93■□□□□ 0.94
USP6NLQ92738 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.93■□□□□ 0.94
USP6NLQ92738 AC018712.1-201ENST00000455767 687 ntBASIC20.93■□□□□ 0.94
USP6NLQ92738 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
USP6NLQ92738 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.93■□□□□ 0.94
USP6NLQ92738 KRT18P58-201ENST00000527480 1120 ntBASIC20.93■□□□□ 0.94
USP6NLQ92738 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.93■□□□□ 0.94
USP6NLQ92738 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.93■□□□□ 0.94
USP6NLQ92738 AC106730.1-201ENST00000566722 1090 ntBASIC20.93■□□□□ 0.94
USP6NLQ92738 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.93■□□□□ 0.94
USP6NLQ92738 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.93■□□□□ 0.94
USP6NLQ92738 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
USP6NLQ92738 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms