Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEPDC1BQ8WUY9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 IRX1P1-201ENST00000438849 1838 ntBASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
DEPDC1BQ8WUY9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 TSPY23P-201ENST00000440136 739 ntBASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 AL691432.3-201ENST00000621860 400 ntBASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DEPDC1BQ8WUY9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 HBZP1-201ENST00000354915 429 ntBASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DEPDC1BQ8WUY9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
DEPDC1BQ8WUY9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
DEPDC1BQ8WUY9 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
DEPDC1BQ8WUY9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms