Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.22■□□□□ 0.67
SH3RF2Q8TEC5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 AL049812.1-201ENST00000432563 2267 ntBASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 PVRIG2P-201ENST00000435460 978 ntBASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 MIR3180-4-201ENST00000582223 153 ntBASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 Z98044.1-201ENST00000632503 1764 ntBASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
SH3RF2Q8TEC5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 MIR3652-201ENST00000579335 131 ntBASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 AP002414.4-201ENST00000589764 1148 ntBASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 HEIH-201ENST00000623091 1652 ntBASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SH3RF2Q8TEC5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 AL357033.4-201ENST00000617703 1807 ntBASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 CHCHD2P8-201ENST00000429873 447 ntBASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 AL020996.1-203ENST00000536896 2307 ntBASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SH3RF2Q8TEC5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms