Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.34■□□□□ 0.69
CCHCR1Q8TD31 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CCHCR1Q8TD31 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCHCR1Q8TD31 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCHCR1Q8TD31 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCHCR1Q8TD31 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
CCHCR1Q8TD31 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
CCHCR1Q8TD31 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CCHCR1Q8TD31 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCHCR1Q8TD31 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.33■□□□□ 0.69
CCHCR1Q8TD31 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCHCR1Q8TD31 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 AL355355.2-201ENST00000442321 338 ntBASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 PRSS44-201ENST00000515154 1146 ntBASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 MTMR9LP-203ENST00000426597 1545 ntBASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 PRORSD1P-202ENST00000563365 2154 ntBASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 AC112777.1-201ENST00000540175 1423 ntBASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCHCR1Q8TD31 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 AC004980.1-204ENST00000429707 299 ntBASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 Z85996.1-201ENST00000494644 937 ntBASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 AC026271.3-201ENST00000571884 352 ntBASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 MIR4785-201ENST00000585005 73 ntBASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 KRT8P32-201ENST00000512863 1461 ntBASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCHCR1Q8TD31 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms