Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLHC1Q8NHS4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 KRT18P29-201ENST00000397031 1267 ntBASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
CLHC1Q8NHS4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 MESTP1-201ENST00000404287 994 ntBASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 FZD10-202ENST00000539839 3282 ntBASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.82■□□□□ 0.44
CLHC1Q8NHS4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 ITM2C-210ENST00000620962 501 ntBASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 AC068880.1-201ENST00000507289 2297 ntBASIC17.81■□□□□ 0.44
CLHC1Q8NHS4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 AC135776.1-201ENST00000319817 2481 ntBASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CLHC1Q8NHS4 PRORSD1P-201ENST00000295112 541 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms