Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 AC009065.1-201ENST00000564055 1225 ntBASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 AC073592.3-201ENST00000625118 1834 ntBASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRFBP1Q8NEF9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 MYLKP1-201ENST00000509077 1580 ntBASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 NEK4P2-201ENST00000580004 1012 ntBASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 AC133561.5-201ENST00000635547 218 ntBASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SRFBP1Q8NEF9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 KRT18P23-201ENST00000435622 1283 ntBASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 AC097493.4-201ENST00000641197 219 ntBASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 HTR7P1-202ENST00000624664 4411 ntBASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRFBP1Q8NEF9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRFBP1Q8NEF9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms