Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC60Q8IWA6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC60Q8IWA6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC60Q8IWA6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 TSPY22P-201ENST00000427496 604 ntBASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 AP002383.4-201ENST00000442518 975 ntBASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 TSSC2-201ENST00000450217 709 ntBASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 BX276092.5-203ENST00000456199 560 ntBASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 AL121672.3-201ENST00000608644 468 ntBASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 AC092119.3-201ENST00000612618 583 ntBASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC60Q8IWA6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC60Q8IWA6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC60Q8IWA6 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
CCDC60Q8IWA6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC60Q8IWA6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCDC60Q8IWA6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 Z83836.1-201ENST00000624605 1642 ntBASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 KRT8P26-201ENST00000534154 1276 ntBASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.57■□□□□ 0.88
CCDC60Q8IWA6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 MYLKP1-201ENST00000509077 1580 ntBASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 AP003733.1-201ENST00000491725 852 ntBASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 AC005332.3-201ENST00000589904 676 ntBASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 ANO7L1-203ENST00000602586 1720 ntBASIC20.56■□□□□ 0.88
CCDC60Q8IWA6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 AC112777.1-201ENST00000540175 1423 ntBASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 MIR149-201ENST00000384879 89 ntBASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 KRT18P48-201ENST00000434763 852 ntBASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 MIR3180-1-201ENST00000580374 94 ntBASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 MIR3180-3-201ENST00000584616 94 ntBASIC20.55■□□□□ 0.88
CCDC60Q8IWA6 AC024563.2-201ENST00000603282 481 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms