Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL55Q7Z7F7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL55Q7Z7F7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL55Q7Z7F7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL55Q7Z7F7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC11.96□□□□□ -0.5
MRPL55Q7Z7F7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL55Q7Z7F7 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
MRPL55Q7Z7F7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
MRPL55Q7Z7F7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 HTR7P1-201ENST00000538670 1336 ntBASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 KSR1P1-201ENST00000446298 240 ntBASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 AL353708.3-201ENST00000610272 989 ntBASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
MRPL55Q7Z7F7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 HEIH-201ENST00000623091 1652 ntBASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 CD99P1-205ENST00000527459 561 ntBASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 C1QBPP2-201ENST00000528754 825 ntBASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
MRPL55Q7Z7F7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms