Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 GPAT2P1-201ENST00000444924 1672 ntBASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
FAM53AQ6NSI3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 AL390955.1-201ENST00000428694 934 ntBASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 AL355355.2-201ENST00000442321 338 ntBASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 AP003071.4-201ENST00000562276 1284 ntBASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 MIR4674-201ENST00000582457 87 ntBASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
FAM53AQ6NSI3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 AC096733.2-201ENST00000609937 1394 ntBASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 FZD10-202ENST00000539839 3282 ntBASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 AL023284.2-201ENST00000405850 579 ntBASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 AC079598.2-202ENST00000546624 1451 ntBASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.38■□□□□ 0.05
FAM53AQ6NSI3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.37■□□□□ 0.05
FAM53AQ6NSI3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FAM53AQ6NSI3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
FAM53AQ6NSI3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
FAM53AQ6NSI3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FAM53AQ6NSI3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FAM53AQ6NSI3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
FAM53AQ6NSI3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FAM53AQ6NSI3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
FAM53AQ6NSI3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms