Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIF1Q5T3J3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRIF1Q5T3J3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LRIF1Q5T3J3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 AC134043.2-201ENST00000624206 2238 ntBASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 AP000593.1-201ENST00000393668 712 ntBASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 AC073648.6-201ENST00000641589 218 ntBASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 FLJ13224-201ENST00000313737 1514 ntBASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 REXO1L9P-201ENST00000604264 2108 ntBASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.5■□□□□ 0.39
LRIF1Q5T3J3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 AC011506.1-201ENST00000474329 610 ntBASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 AC008622.2-201ENST00000617006 1229 ntBASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 CR392000.1-201ENST00000624770 1228 ntBASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRIF1Q5T3J3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 LINC00896-202ENST00000609602 2128 ntBASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 ID1-201ENST00000376105 1233 ntBASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 MIR564-202ENST00000385049 94 ntBASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 B3GAT3P1-201ENST00000471720 806 ntBASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRIF1Q5T3J3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRIF1Q5T3J3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms