Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 AC091076.1-201ENST00000610741 619 ntBASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 AC112777.1-201ENST00000540175 1423 ntBASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
TTC39AQ5SRH9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 AC009065.1-201ENST00000564055 1225 ntBASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 AP000550.4-202ENST00000639755 178 ntBASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 AC093525.10-201ENST00000625130 1569 ntBASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC22.54■■□□□ 1.2
TTC39AQ5SRH9 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 IER3-202ENST00000376377 1350 ntBASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 AL163051.1-201ENST00000569214 1512 ntBASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 HLA-F-220ENST00000434407 884 ntBASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
TTC39AQ5SRH9 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.52■■□□□ 1.2
TTC39AQ5SRH9 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.52■■□□□ 1.2
TTC39AQ5SRH9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.52■■□□□ 1.2
TTC39AQ5SRH9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
TTC39AQ5SRH9 MYLKP1-201ENST00000509077 1580 ntBASIC22.52■■□□□ 1.2
TTC39AQ5SRH9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC39AQ5SRH9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC22.52■■□□□ 1.2
TTC39AQ5SRH9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TTC39AQ5SRH9 PVRIG2P-201ENST00000435460 978 ntBASIC22.52■■□□□ 1.2
TTC39AQ5SRH9 PTK2-216ENST00000519881 863 ntTSL 3 BASIC22.52■■□□□ 1.2
TTC39AQ5SRH9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
TTC39AQ5SRH9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.52■■□□□ 1.2
TTC39AQ5SRH9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TTC39AQ5SRH9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC22.52■■□□□ 1.2
TTC39AQ5SRH9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 FXN-203ENST00000396366 922 ntTSL 2 BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 AL645929.1-201ENST00000420084 975 ntBASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 AC099343.3-201ENST00000605834 2503 ntBASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TTC39AQ5SRH9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms