Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 MIPEPP3-201ENST00000412105 444 ntBASIC15.29■□□□□ 0.04
SUPT4H1P63272 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 AC091874.3-201ENST00000512672 1195 ntBASIC15.29■□□□□ 0.04
SUPT4H1P63272 C1QL1P1-201ENST00000568105 661 ntBASIC15.29■□□□□ 0.04
SUPT4H1P63272 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SUPT4H1P63272 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SUPT4H1P63272 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 RARRES2P6-201ENST00000567333 442 ntBASIC15.28■□□□□ 0.04
SUPT4H1P63272 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 HLA-B-256ENST00000639848 1089 ntBASIC15.28■□□□□ 0.04
SUPT4H1P63272 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SUPT4H1P63272 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.28■□□□□ 0.04
SUPT4H1P63272 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
SUPT4H1P63272 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SUPT4H1P63272 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.27■□□□□ 0.04
SUPT4H1P63272 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SUPT4H1P63272 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SUPT4H1P63272 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SUPT4H1P63272 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SUPT4H1P63272 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SUPT4H1P63272 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SUPT4H1P63272 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SUPT4H1P63272 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SUPT4H1P63272 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.27■□□□□ 0.04
SUPT4H1P63272 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SUPT4H1P63272 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.27■□□□□ 0.04
SUPT4H1P63272 PNMA6B-201ENST00000538162 1200 ntBASIC15.27■□□□□ 0.04
SUPT4H1P63272 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SUPT4H1P63272 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.27■□□□□ 0.04
SUPT4H1P63272 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.27■□□□□ 0.04
SUPT4H1P63272 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.27■□□□□ 0.04
SUPT4H1P63272 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.27■□□□□ 0.04
SUPT4H1P63272 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SUPT4H1P63272 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SUPT4H1P63272 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms