Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CMC4P56277 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.83□□□□□ -0.2
CMC4P56277 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMC4P56277 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CMC4P56277 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMC4P56277 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.83□□□□□ -0.2
CMC4P56277 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMC4P56277 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMC4P56277 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMC4P56277 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMC4P56277 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CMC4P56277 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CMC4P56277 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.83□□□□□ -0.2
CMC4P56277 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
CMC4P56277 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CMC4P56277 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.82□□□□□ -0.2
CMC4P56277 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.82□□□□□ -0.2
CMC4P56277 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.82□□□□□ -0.2
CMC4P56277 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
CMC4P56277 MTMR9LP-203ENST00000426597 1545 ntBASIC13.82□□□□□ -0.2
CMC4P56277 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 FAM8A6P-201ENST00000407496 1135 ntBASIC13.82□□□□□ -0.2
CMC4P56277 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.82□□□□□ -0.2
CMC4P56277 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.82□□□□□ -0.2
CMC4P56277 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.82□□□□□ -0.2
CMC4P56277 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.82□□□□□ -0.2
CMC4P56277 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.82□□□□□ -0.2
CMC4P56277 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.82□□□□□ -0.2
CMC4P56277 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CMC4P56277 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CMC4P56277 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.82□□□□□ -0.2
CMC4P56277 AL590326.2-201ENST00000625139 305 ntBASIC13.82□□□□□ -0.2
CMC4P56277 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.82□□□□□ -0.2
CMC4P56277 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC13.82□□□□□ -0.2
CMC4P56277 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC13.82□□□□□ -0.2
CMC4P56277 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC13.82□□□□□ -0.2
CMC4P56277 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CMC4P56277 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC13.82□□□□□ -0.2
CMC4P56277 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
CMC4P56277 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC13.82□□□□□ -0.2
CMC4P56277 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 AC018445.3-201ENST00000624177 1945 ntBASIC13.82□□□□□ -0.2
CMC4P56277 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC13.82□□□□□ -0.2
CMC4P56277 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CMC4P56277 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CMC4P56277 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CMC4P56277 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CMC4P56277 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.81□□□□□ -0.2
CMC4P56277 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.81□□□□□ -0.2
CMC4P56277 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.81□□□□□ -0.2
CMC4P56277 YBX1P2-201ENST00000489612 999 ntBASIC13.81□□□□□ -0.2
CMC4P56277 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.81□□□□□ -0.2
CMC4P56277 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.81□□□□□ -0.2
CMC4P56277 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.81□□□□□ -0.2
CMC4P56277 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.81□□□□□ -0.2
CMC4P56277 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CMC4P56277 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC13.81□□□□□ -0.2
CMC4P56277 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CMC4P56277 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CMC4P56277 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CMC4P56277 NFIC-211ENST00000641145 8399 ntBASIC13.81□□□□□ -0.2
CMC4P56277 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms