Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
PAX9P55771 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PAX9P55771 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.89□□□□□ -0.03
PAX9P55771 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.89□□□□□ -0.03
PAX9P55771 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PAX9P55771 AC006970.2-201ENST00000450065 779 ntBASIC14.89□□□□□ -0.03
PAX9P55771 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.89□□□□□ -0.03
PAX9P55771 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.89□□□□□ -0.03
PAX9P55771 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.89□□□□□ -0.03
PAX9P55771 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.89□□□□□ -0.03
PAX9P55771 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PAX9P55771 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.88□□□□□ -0.03
PAX9P55771 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.88□□□□□ -0.03
PAX9P55771 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PAX9P55771 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 AC141586.5-201ENST00000624546 2050 ntBASIC14.88□□□□□ -0.03
PAX9P55771 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.88□□□□□ -0.03
PAX9P55771 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.88□□□□□ -0.03
PAX9P55771 AL096828.2-201ENST00000567259 1965 ntBASIC14.88□□□□□ -0.03
PAX9P55771 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.88□□□□□ -0.03
PAX9P55771 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.88□□□□□ -0.03
PAX9P55771 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.88□□□□□ -0.03
PAX9P55771 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.88□□□□□ -0.03
PAX9P55771 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.88□□□□□ -0.03
PAX9P55771 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.88□□□□□ -0.03
PAX9P55771 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 AC060766.5-201ENST00000590539 871 ntBASIC14.88□□□□□ -0.03
PAX9P55771 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
PAX9P55771 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 KRT8P11-201ENST00000409686 1436 ntBASIC14.88□□□□□ -0.03
PAX9P55771 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
PAX9P55771 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.88□□□□□ -0.03
PAX9P55771 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 AC006116.8-202ENST00000587620 1550 ntBASIC14.88□□□□□ -0.03
PAX9P55771 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PAX9P55771 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PAX9P55771 AC084018.2-201ENST00000613093 2607 ntBASIC14.88□□□□□ -0.03
PAX9P55771 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
PAX9P55771 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PAX9P55771 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PAX9P55771 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
PAX9P55771 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.87□□□□□ -0.03
PAX9P55771 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
PAX9P55771 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PAX9P55771 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.87□□□□□ -0.03
PAX9P55771 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
PAX9P55771 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
PAX9P55771 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.87□□□□□ -0.03
PAX9P55771 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.87□□□□□ -0.03
PAX9P55771 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
PAX9P55771 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.87□□□□□ -0.03
PAX9P55771 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.87□□□□□ -0.03
PAX9P55771 Z85996.1-201ENST00000494644 937 ntBASIC14.87□□□□□ -0.03
PAX9P55771 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.87□□□□□ -0.03
PAX9P55771 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.87□□□□□ -0.03
PAX9P55771 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.87□□□□□ -0.03
PAX9P55771 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.87□□□□□ -0.03
PAX9P55771 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.87□□□□□ -0.03
PAX9P55771 AC008687.6-201ENST00000596318 630 ntBASIC14.87□□□□□ -0.03
PAX9P55771 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.87□□□□□ -0.03
PAX9P55771 Six3os1_6.1-201ENST00000620790 196 ntBASIC14.87□□□□□ -0.03
PAX9P55771 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
PAX9P55771 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms