Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRCA2P51587 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.7■□□□□ 0.9
BRCA2P51587 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
BRCA2P51587 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRCA2P51587 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRCA2P51587 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRCA2P51587 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRCA2P51587 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRCA2P51587 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.7■□□□□ 0.9
BRCA2P51587 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.7■□□□□ 0.9
BRCA2P51587 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
BRCA2P51587 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.7■□□□□ 0.9
BRCA2P51587 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.7■□□□□ 0.9
BRCA2P51587 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRCA2P51587 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRCA2P51587 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRCA2P51587 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.7■□□□□ 0.9
BRCA2P51587 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BRCA2P51587 Z83851.2-201ENST00000609564 659 ntBASIC20.7■□□□□ 0.9
BRCA2P51587 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.7■□□□□ 0.9
BRCA2P51587 KRT8P3-201ENST00000519669 1449 ntBASIC20.7■□□□□ 0.9
BRCA2P51587 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
BRCA2P51587 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
BRCA2P51587 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
BRCA2P51587 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRCA2P51587 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.69■□□□□ 0.9
BRCA2P51587 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
BRCA2P51587 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRCA2P51587 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.69■□□□□ 0.9
BRCA2P51587 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.69■□□□□ 0.9
BRCA2P51587 AC083906.6-201ENST00000641366 219 ntBASIC20.69■□□□□ 0.9
BRCA2P51587 AC079781.4-201ENST00000641908 219 ntBASIC20.69■□□□□ 0.9
BRCA2P51587 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRCA2P51587 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
BRCA2P51587 AL353692.3-201ENST00000407031 1396 ntBASIC20.69■□□□□ 0.9
BRCA2P51587 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRCA2P51587 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRCA2P51587 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRCA2P51587 CNN2P11-201ENST00000429351 262 ntBASIC20.69■□□□□ 0.9
BRCA2P51587 AC244107.1-201ENST00000442033 332 ntBASIC20.69■□□□□ 0.9
BRCA2P51587 ALG1L5P-201ENST00000482043 771 ntBASIC20.69■□□□□ 0.9
BRCA2P51587 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.69■□□□□ 0.9
BRCA2P51587 GUSBP12-201ENST00000513727 720 ntBASIC20.69■□□□□ 0.9
BRCA2P51587 AC125437.2-201ENST00000625180 2167 ntBASIC20.69■□□□□ 0.9
BRCA2P51587 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRCA2P51587 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRCA2P51587 HLA-J-201ENST00000462773 1622 ntBASIC20.69■□□□□ 0.9
BRCA2P51587 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRCA2P51587 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRCA2P51587 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
BRCA2P51587 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.69■□□□□ 0.9
BRCA2P51587 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.69■□□□□ 0.9
BRCA2P51587 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.69■□□□□ 0.9
BRCA2P51587 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.69■□□□□ 0.9
BRCA2P51587 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRCA2P51587 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRCA2P51587 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRCA2P51587 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRCA2P51587 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRCA2P51587 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.68■□□□□ 0.9
BRCA2P51587 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.68■□□□□ 0.9
BRCA2P51587 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.68■□□□□ 0.9
BRCA2P51587 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.68■□□□□ 0.9
BRCA2P51587 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRCA2P51587 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRCA2P51587 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRCA2P51587 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRCA2P51587 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.68■□□□□ 0.9
BRCA2P51587 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.68■□□□□ 0.9
BRCA2P51587 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.68■□□□□ 0.9
BRCA2P51587 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.68■□□□□ 0.9
BRCA2P51587 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.68■□□□□ 0.9
BRCA2P51587 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.68■□□□□ 0.9
BRCA2P51587 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRCA2P51587 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.68■□□□□ 0.9
BRCA2P51587 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.68■□□□□ 0.9
BRCA2P51587 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.68■□□□□ 0.9
BRCA2P51587 AC011840.4-201ENST00000578471 627 ntBASIC20.68■□□□□ 0.9
BRCA2P51587 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.68■□□□□ 0.9
BRCA2P51587 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
BRCA2P51587 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRCA2P51587 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRCA2P51587 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRCA2P51587 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRCA2P51587 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
BRCA2P51587 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.67■□□□□ 0.9
BRCA2P51587 RPL28-205ENST00000558131 444 ntTSL 5 BASIC20.67■□□□□ 0.9
BRCA2P51587 AC021087.4-201ENST00000563761 564 ntBASIC20.67■□□□□ 0.9
BRCA2P51587 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRCA2P51587 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.67■□□□□ 0.9
BRCA2P51587 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.67■□□□□ 0.9
BRCA2P51587 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.67■□□□□ 0.9
BRCA2P51587 RNA5SP415-201ENST00000517246 115 ntBASIC20.67■□□□□ 0.9
BRCA2P51587 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRCA2P51587 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.67■□□□□ 0.9
BRCA2P51587 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.66■□□□□ 0.9
BRCA2P51587 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.66■□□□□ 0.9
BRCA2P51587 AC007967.2-201ENST00000432613 625 ntBASIC20.66■□□□□ 0.9
BRCA2P51587 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.66■□□□□ 0.9
BRCA2P51587 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms