Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.88■□□□□ 0.93
CENPFP49454 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.88■□□□□ 0.93
CENPFP49454 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CENPFP49454 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.88■□□□□ 0.93
CENPFP49454 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CENPFP49454 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.88■□□□□ 0.93
CENPFP49454 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CENPFP49454 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.88■□□□□ 0.93
CENPFP49454 RPS2P1-201ENST00000434010 821 ntBASIC20.88■□□□□ 0.93
CENPFP49454 DNAJB3-201ENST00000446806 729 ntBASIC20.88■□□□□ 0.93
CENPFP49454 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.88■□□□□ 0.93
CENPFP49454 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CENPFP49454 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.88■□□□□ 0.93
CENPFP49454 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.88■□□□□ 0.93
CENPFP49454 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.88■□□□□ 0.93
CENPFP49454 AC007952.6-201ENST00000573168 2673 ntBASIC20.88■□□□□ 0.93
CENPFP49454 AC003957.1-201ENST00000625108 2673 ntBASIC20.88■□□□□ 0.93
CENPFP49454 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 POM121L3P-201ENST00000419331 1163 ntBASIC20.87■□□□□ 0.93
CENPFP49454 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 SPCS2P1-201ENST00000561636 679 ntBASIC20.87■□□□□ 0.93
CENPFP49454 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.87■□□□□ 0.93
CENPFP49454 KRT8P3-201ENST00000519669 1449 ntBASIC20.87■□□□□ 0.93
CENPFP49454 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.87■□□□□ 0.93
CENPFP49454 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 AP003733.1-201ENST00000491725 852 ntBASIC20.87■□□□□ 0.93
CENPFP49454 GUSBP12-201ENST00000513727 720 ntBASIC20.87■□□□□ 0.93
CENPFP49454 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.87■□□□□ 0.93
CENPFP49454 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.87■□□□□ 0.93
CENPFP49454 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.87■□□□□ 0.93
CENPFP49454 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
CENPFP49454 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.87■□□□□ 0.93
CENPFP49454 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CENPFP49454 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CENPFP49454 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CENPFP49454 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CENPFP49454 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.86■□□□□ 0.93
CENPFP49454 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CENPFP49454 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CENPFP49454 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CENPFP49454 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CENPFP49454 KRT8P7-201ENST00000533003 1432 ntBASIC20.86■□□□□ 0.93
CENPFP49454 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CENPFP49454 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CENPFP49454 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CENPFP49454 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CENPFP49454 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.86■□□□□ 0.93
CENPFP49454 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.86■□□□□ 0.93
CENPFP49454 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.86■□□□□ 0.93
CENPFP49454 AL353692.3-201ENST00000407031 1396 ntBASIC20.86■□□□□ 0.93
CENPFP49454 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CENPFP49454 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CENPFP49454 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.85■□□□□ 0.93
CENPFP49454 AC104390.1-201ENST00000555663 520 ntBASIC20.85■□□□□ 0.93
CENPFP49454 AC114341.1-201ENST00000618070 349 ntBASIC20.85■□□□□ 0.93
CENPFP49454 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.85■□□□□ 0.93
CENPFP49454 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
CENPFP49454 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CENPFP49454 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CENPFP49454 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.85■□□□□ 0.93
CENPFP49454 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CENPFP49454 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.85■□□□□ 0.93
CENPFP49454 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CENPFP49454 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.85■□□□□ 0.93
CENPFP49454 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CENPFP49454 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.85■□□□□ 0.93
CENPFP49454 AC025062.2-201ENST00000605477 670 ntBASIC20.85■□□□□ 0.93
CENPFP49454 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CENPFP49454 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CENPFP49454 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.84■□□□□ 0.93
CENPFP49454 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CENPFP49454 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CENPFP49454 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CENPFP49454 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.84■□□□□ 0.93
CENPFP49454 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.84■□□□□ 0.93
CENPFP49454 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.84■□□□□ 0.93
CENPFP49454 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CENPFP49454 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CENPFP49454 AC006333.2-201ENST00000607957 2099 ntBASIC20.84■□□□□ 0.93
CENPFP49454 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CENPFP49454 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.84■□□□□ 0.93
CENPFP49454 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CENPFP49454 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.84■□□□□ 0.93
CENPFP49454 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CENPFP49454 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC20.84■□□□□ 0.93
CENPFP49454 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CENPFP49454 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms