Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
NCK1P16333 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
NCK1P16333 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NCK1P16333 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.55■□□□□ 0.4
NCK1P16333 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NCK1P16333 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCK1P16333 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NCK1P16333 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCK1P16333 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.54■□□□□ 0.4
NCK1P16333 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCK1P16333 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCK1P16333 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCK1P16333 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NCK1P16333 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
NCK1P16333 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NCK1P16333 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.54■□□□□ 0.4
NCK1P16333 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCK1P16333 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.54■□□□□ 0.4
NCK1P16333 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.54■□□□□ 0.4
NCK1P16333 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
NCK1P16333 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.54■□□□□ 0.4
NCK1P16333 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCK1P16333 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NCK1P16333 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NCK1P16333 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.54■□□□□ 0.4
NCK1P16333 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.54■□□□□ 0.4
NCK1P16333 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.54■□□□□ 0.4
NCK1P16333 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.54■□□□□ 0.4
NCK1P16333 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
NCK1P16333 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
NCK1P16333 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCK1P16333 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCK1P16333 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
NCK1P16333 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NCK1P16333 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NCK1P16333 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCK1P16333 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.53■□□□□ 0.4
NCK1P16333 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.53■□□□□ 0.4
NCK1P16333 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCK1P16333 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCK1P16333 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCK1P16333 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCK1P16333 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NCK1P16333 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NCK1P16333 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCK1P16333 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NCK1P16333 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.53■□□□□ 0.4
NCK1P16333 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.53■□□□□ 0.4
NCK1P16333 NBPF21P-201ENST00000425093 1451 ntBASIC17.53■□□□□ 0.4
NCK1P16333 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.53■□□□□ 0.4
NCK1P16333 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.53■□□□□ 0.4
NCK1P16333 TSPY6P-201ENST00000448518 926 ntBASIC17.53■□□□□ 0.4
NCK1P16333 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.53■□□□□ 0.4
NCK1P16333 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.53■□□□□ 0.4
NCK1P16333 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.53■□□□□ 0.4
NCK1P16333 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
NCK1P16333 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.53■□□□□ 0.4
NCK1P16333 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NCK1P16333 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.53■□□□□ 0.4
NCK1P16333 AC112777.1-201ENST00000540175 1423 ntBASIC17.53■□□□□ 0.4
NCK1P16333 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCK1P16333 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NCK1P16333 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.52■□□□□ 0.4
NCK1P16333 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NCK1P16333 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
NCK1P16333 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCK1P16333 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NCK1P16333 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCK1P16333 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCK1P16333 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NCK1P16333 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
NCK1P16333 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.52■□□□□ 0.4
NCK1P16333 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCK1P16333 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCK1P16333 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.52■□□□□ 0.4
NCK1P16333 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCK1P16333 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCK1P16333 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.52■□□□□ 0.4
NCK1P16333 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCK1P16333 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCK1P16333 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.52■□□□□ 0.4
NCK1P16333 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.52■□□□□ 0.4
NCK1P16333 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.52■□□□□ 0.4
NCK1P16333 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
NCK1P16333 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.52■□□□□ 0.4
NCK1P16333 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCK1P16333 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.52■□□□□ 0.4
NCK1P16333 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCK1P16333 MYC-208ENST00000641036 567 ntBASIC17.52■□□□□ 0.4
NCK1P16333 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.52■□□□□ 0.4
NCK1P16333 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NCK1P16333 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCK1P16333 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCK1P16333 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.52■□□□□ 0.39
NCK1P16333 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NCK1P16333 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NCK1P16333 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms