Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A1P12107 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
COL11A1P12107 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.04■□□□□ 0.96
COL11A1P12107 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A1P12107 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.04■□□□□ 0.96
COL11A1P12107 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A1P12107 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL11A1P12107 AL353801.3-201ENST00000609898 542 ntBASIC21.04■□□□□ 0.96
COL11A1P12107 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
COL11A1P12107 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.04■□□□□ 0.96
COL11A1P12107 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COL11A1P12107 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A1P12107 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC21.03■□□□□ 0.96
COL11A1P12107 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.03■□□□□ 0.96
COL11A1P12107 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.03■□□□□ 0.96
COL11A1P12107 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A1P12107 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A1P12107 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.03■□□□□ 0.96
COL11A1P12107 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
COL11A1P12107 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.03■□□□□ 0.96
COL11A1P12107 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.03■□□□□ 0.96
COL11A1P12107 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A1P12107 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC21.03■□□□□ 0.96
COL11A1P12107 AC008608.2-201ENST00000606089 416 ntBASIC21.03■□□□□ 0.96
COL11A1P12107 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC21.03■□□□□ 0.96
COL11A1P12107 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.03■□□□□ 0.96
COL11A1P12107 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A1P12107 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A1P12107 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A1P12107 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC21.03■□□□□ 0.96
COL11A1P12107 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A1P12107 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A1P12107 ANO7L1-203ENST00000602586 1720 ntBASIC21.03■□□□□ 0.96
COL11A1P12107 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A1P12107 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.03■□□□□ 0.96
COL11A1P12107 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COL11A1P12107 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A1P12107 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A1P12107 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A1P12107 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
COL11A1P12107 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
COL11A1P12107 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.02■□□□□ 0.96
COL11A1P12107 AC106795.1-205ENST00000512851 1056 ntBASIC21.02■□□□□ 0.96
COL11A1P12107 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A1P12107 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.02■□□□□ 0.96
COL11A1P12107 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.02■□□□□ 0.96
COL11A1P12107 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A1P12107 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A1P12107 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.02■□□□□ 0.96
COL11A1P12107 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A1P12107 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
COL11A1P12107 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL11A1P12107 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL11A1P12107 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COL11A1P12107 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A1P12107 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A1P12107 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
COL11A1P12107 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
COL11A1P12107 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC21.01■□□□□ 0.95
COL11A1P12107 AC096582.2-201ENST00000510860 516 ntBASIC21.01■□□□□ 0.95
COL11A1P12107 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.01■□□□□ 0.95
COL11A1P12107 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A1P12107 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A1P12107 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
COL11A1P12107 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A1P12107 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.01■□□□□ 0.95
COL11A1P12107 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A1P12107 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A1P12107 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COL11A1P12107 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.01■□□□□ 0.95
COL11A1P12107 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.01■□□□□ 0.95
COL11A1P12107 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.01■□□□□ 0.95
COL11A1P12107 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.01■□□□□ 0.95
COL11A1P12107 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.01■□□□□ 0.95
COL11A1P12107 AC091304.2-201ENST00000564639 760 ntBASIC21.01■□□□□ 0.95
COL11A1P12107 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
COL11A1P12107 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A1P12107 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A1P12107 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL11A1P12107 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL11A1P12107 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL11A1P12107 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A1P12107 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21■□□□□ 0.95
COL11A1P12107 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A1P12107 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21■□□□□ 0.95
COL11A1P12107 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21■□□□□ 0.95
COL11A1P12107 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21■□□□□ 0.95
COL11A1P12107 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21■□□□□ 0.95
COL11A1P12107 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A1P12107 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21■□□□□ 0.95
COL11A1P12107 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A1P12107 MIR7706-201ENST00000613747 67 ntBASIC21■□□□□ 0.95
COL11A1P12107 ANKRD20A8P-203ENST00000641373 517 ntBASIC21■□□□□ 0.95
COL11A1P12107 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A1P12107 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
COL11A1P12107 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
COL11A1P12107 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21■□□□□ 0.95
COL11A1P12107 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21■□□□□ 0.95
COL11A1P12107 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
COL11A1P12107 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms