Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PF4V1P10720 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
PF4V1P10720 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PF4V1P10720 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PF4V1P10720 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
PF4V1P10720 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PF4V1P10720 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.71□□□□□ -0.05
PF4V1P10720 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PF4V1P10720 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PF4V1P10720 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PF4V1P10720 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.71□□□□□ -0.05
PF4V1P10720 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PF4V1P10720 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PF4V1P10720 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PF4V1P10720 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PF4V1P10720 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PF4V1P10720 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PF4V1P10720 MCCD1P1-208ENST00000445732 328 ntBASIC14.71□□□□□ -0.05
PF4V1P10720 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.71□□□□□ -0.05
PF4V1P10720 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.71□□□□□ -0.05
PF4V1P10720 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.71□□□□□ -0.05
PF4V1P10720 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.71□□□□□ -0.05
PF4V1P10720 AC008622.2-201ENST00000617006 1229 ntBASIC14.71□□□□□ -0.05
PF4V1P10720 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PF4V1P10720 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PF4V1P10720 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PF4V1P10720 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.71□□□□□ -0.05
PF4V1P10720 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC14.71□□□□□ -0.06
PF4V1P10720 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PF4V1P10720 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PF4V1P10720 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PF4V1P10720 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PF4V1P10720 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PF4V1P10720 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.7□□□□□ -0.06
PF4V1P10720 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.7□□□□□ -0.06
PF4V1P10720 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PF4V1P10720 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.7□□□□□ -0.06
PF4V1P10720 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
PF4V1P10720 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PF4V1P10720 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.7□□□□□ -0.06
PF4V1P10720 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.7□□□□□ -0.06
PF4V1P10720 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 AL512353.2-201ENST00000448759 1962 ntBASIC14.7□□□□□ -0.06
PF4V1P10720 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PF4V1P10720 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 RCC2P3-201ENST00000418112 1537 ntBASIC14.7□□□□□ -0.06
PF4V1P10720 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
PF4V1P10720 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.7□□□□□ -0.06
PF4V1P10720 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PF4V1P10720 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PF4V1P10720 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PF4V1P10720 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PF4V1P10720 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.69□□□□□ -0.06
PF4V1P10720 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PF4V1P10720 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PF4V1P10720 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PF4V1P10720 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
PF4V1P10720 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PF4V1P10720 KRT8P45-201ENST00000414328 1447 ntBASIC14.69□□□□□ -0.06
PF4V1P10720 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PF4V1P10720 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PF4V1P10720 GPAT2P1-201ENST00000444924 1672 ntBASIC14.69□□□□□ -0.06
PF4V1P10720 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PF4V1P10720 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.69□□□□□ -0.06
PF4V1P10720 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.69□□□□□ -0.06
PF4V1P10720 AL031133.1-201ENST00000406807 723 ntBASIC14.69□□□□□ -0.06
PF4V1P10720 AL671277.2-201ENST00000458060 996 ntBASIC14.69□□□□□ -0.06
PF4V1P10720 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PF4V1P10720 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.69□□□□□ -0.06
PF4V1P10720 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.69□□□□□ -0.06
PF4V1P10720 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.69□□□□□ -0.06
PF4V1P10720 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.69□□□□□ -0.06
PF4V1P10720 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.69□□□□□ -0.06
PF4V1P10720 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.69□□□□□ -0.06
PF4V1P10720 AP000550.4-202ENST00000639755 178 ntBASIC14.69□□□□□ -0.06
PF4V1P10720 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PF4V1P10720 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PF4V1P10720 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms