Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC22.28■■□□□ 1.16
CHGBP05060 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.28■■□□□ 1.16
CHGBP05060 AC087388.1-201ENST00000571370 1112 ntBASIC22.28■■□□□ 1.16
CHGBP05060 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CHGBP05060 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 MYLKP1-201ENST00000509077 1580 ntBASIC22.28■■□□□ 1.16
CHGBP05060 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.28■■□□□ 1.16
CHGBP05060 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
CHGBP05060 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 SDHAP2-201ENST00000455183 2001 ntBASIC22.28■■□□□ 1.16
CHGBP05060 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CHGBP05060 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CHGBP05060 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHGBP05060 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHGBP05060 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CHGBP05060 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC22.27■■□□□ 1.16
CHGBP05060 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CHGBP05060 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC22.27■■□□□ 1.16
CHGBP05060 AL163051.1-201ENST00000569214 1512 ntBASIC22.27■■□□□ 1.16
CHGBP05060 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CHGBP05060 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHGBP05060 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHGBP05060 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHGBP05060 HBZP1-201ENST00000354915 429 ntBASIC22.27■■□□□ 1.16
CHGBP05060 HOMER2P1-201ENST00000455653 964 ntBASIC22.27■■□□□ 1.16
CHGBP05060 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.27■■□□□ 1.16
CHGBP05060 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CHGBP05060 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.27■■□□□ 1.16
CHGBP05060 CLN6-204ENST00000564752 900 ntTSL 3 BASIC22.27■■□□□ 1.16
CHGBP05060 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC22.27■■□□□ 1.16
CHGBP05060 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CHGBP05060 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.27■■□□□ 1.16
CHGBP05060 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHGBP05060 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CHGBP05060 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC22.27■■□□□ 1.16
CHGBP05060 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CHGBP05060 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC22.27■■□□□ 1.16
CHGBP05060 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
CHGBP05060 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
CHGBP05060 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHGBP05060 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CHGBP05060 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.26■■□□□ 1.15
CHGBP05060 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CHGBP05060 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CHGBP05060 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHGBP05060 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CHGBP05060 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
CHGBP05060 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CHGBP05060 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.26■■□□□ 1.15
CHGBP05060 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC22.26■■□□□ 1.15
CHGBP05060 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHGBP05060 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHGBP05060 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CHGBP05060 MED25-212ENST00000618715 1467 ntTSL 5 BASIC22.26■■□□□ 1.15
CHGBP05060 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22.26■■□□□ 1.15
CHGBP05060 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHGBP05060 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.26■■□□□ 1.15
CHGBP05060 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHGBP05060 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.26■■□□□ 1.15
CHGBP05060 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CHGBP05060 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CHGBP05060 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC22.25■■□□□ 1.15
CHGBP05060 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC22.25■■□□□ 1.15
CHGBP05060 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
CHGBP05060 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHGBP05060 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHGBP05060 AL138781.2-201ENST00000617896 1843 ntBASIC22.25■■□□□ 1.15
CHGBP05060 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CHGBP05060 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.25■■□□□ 1.15
CHGBP05060 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHGBP05060 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHGBP05060 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC22.25■■□□□ 1.15
CHGBP05060 FAM86EP-206ENST00000510506 987 ntBASIC22.25■■□□□ 1.15
CHGBP05060 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.25■■□□□ 1.15
CHGBP05060 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHGBP05060 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHGBP05060 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.25■■□□□ 1.15
CHGBP05060 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC22.25■■□□□ 1.15
CHGBP05060 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC22.25■■□□□ 1.15
CHGBP05060 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.25■■□□□ 1.15
CHGBP05060 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC22.25■■□□□ 1.15
CHGBP05060 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.25■■□□□ 1.15
CHGBP05060 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHGBP05060 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHGBP05060 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CHGBP05060 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHGBP05060 KRT8P7-201ENST00000533003 1432 ntBASIC22.24■■□□□ 1.15
CHGBP05060 LINC01311-201ENST00000565162 1445 ntBASIC22.24■■□□□ 1.15
CHGBP05060 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC22.24■■□□□ 1.15
CHGBP05060 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHGBP05060 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CHGBP05060 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CHGBP05060 AL391807.1-203ENST00000604392 2365 ntBASIC22.24■■□□□ 1.15
CHGBP05060 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC22.24■■□□□ 1.15
CHGBP05060 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms