Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPB1P04440 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPB1P04440 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPB1P04440 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPB1P04440 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPB1P04440 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPB1P04440 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPB1P04440 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DPB1P04440 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DPB1P04440 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DPB1P04440 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPB1P04440 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DPB1P04440 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 KRASP1-201ENST00000407852 552 ntBASIC16.69■□□□□ 0.26
HLA-DPB1P04440 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 C1QBPP2-201ENST00000528754 825 ntBASIC16.69■□□□□ 0.26
HLA-DPB1P04440 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 RN7SL471P-201ENST00000580476 299 ntBASIC16.69■□□□□ 0.26
HLA-DPB1P04440 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 ITM2C-210ENST00000620962 501 ntBASIC16.69■□□□□ 0.26
HLA-DPB1P04440 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 LINC00896-202ENST00000609602 2128 ntBASIC16.69■□□□□ 0.26
HLA-DPB1P04440 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DPB1P04440 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 ABHD17AP1-201ENST00000358206 933 ntBASIC16.68■□□□□ 0.26
HLA-DPB1P04440 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.68■□□□□ 0.26
HLA-DPB1P04440 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DPB1P04440 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HLA-DPB1P04440 SLC25A6P5-201ENST00000435663 894 ntBASIC16.67■□□□□ 0.26
HLA-DPB1P04440 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms