Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.54□□□□□ -0.56
APOBP04114 WBP2-203ENST00000433525 928 ntTSL 2 BASIC11.54□□□□□ -0.56
APOBP04114 BCRP1-201ENST00000444246 691 ntBASIC11.54□□□□□ -0.56
APOBP04114 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
APOBP04114 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC11.54□□□□□ -0.56
APOBP04114 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
APOBP04114 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
APOBP04114 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC11.53□□□□□ -0.56
APOBP04114 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOBP04114 PPOX-214ENST00000535223 664 ntTSL 3 BASIC11.53□□□□□ -0.56
APOBP04114 Z83851.2-201ENST00000609564 659 ntBASIC11.53□□□□□ -0.56
APOBP04114 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC11.53□□□□□ -0.56
APOBP04114 KRT89P-201ENST00000620027 1478 ntBASIC11.53□□□□□ -0.56
APOBP04114 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC11.53□□□□□ -0.56
APOBP04114 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOBP04114 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.53□□□□□ -0.56
APOBP04114 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.53□□□□□ -0.56
APOBP04114 AL031432.2-201ENST00000566714 459 ntBASIC11.53□□□□□ -0.56
APOBP04114 AL928711.1-201ENST00000570165 459 ntBASIC11.53□□□□□ -0.56
APOBP04114 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.53□□□□□ -0.56
APOBP04114 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOBP04114 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOBP04114 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC11.53□□□□□ -0.56
APOBP04114 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOBP04114 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOBP04114 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOBP04114 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOBP04114 PMP22-202ENST00000395936 816 ntTSL 3 BASIC11.53□□□□□ -0.56
APOBP04114 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOBP04114 KRT18P2-201ENST00000447938 1258 ntBASIC11.53□□□□□ -0.56
APOBP04114 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOBP04114 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
APOBP04114 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
APOBP04114 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
APOBP04114 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.53□□□□□ -0.56
APOBP04114 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
APOBP04114 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC11.53□□□□□ -0.56
APOBP04114 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOBP04114 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOBP04114 RPS8P6-201ENST00000426177 609 ntBASIC11.53□□□□□ -0.56
APOBP04114 AC007967.2-201ENST00000432613 625 ntBASIC11.53□□□□□ -0.56
APOBP04114 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.53□□□□□ -0.56
APOBP04114 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.53□□□□□ -0.56
APOBP04114 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
APOBP04114 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOBP04114 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
APOBP04114 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
APOBP04114 KRT8P50-201ENST00000562022 1438 ntBASIC11.53□□□□□ -0.56
APOBP04114 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC11.52□□□□□ -0.56
APOBP04114 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOBP04114 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOBP04114 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOBP04114 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC11.52□□□□□ -0.56
APOBP04114 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOBP04114 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOBP04114 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC11.52□□□□□ -0.56
APOBP04114 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOBP04114 OR7E47P-204ENST00000575924 449 ntBASIC11.52□□□□□ -0.56
APOBP04114 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.52□□□□□ -0.56
APOBP04114 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC11.52□□□□□ -0.56
APOBP04114 LBX2-AS1-202ENST00000603175 2083 ntBASIC11.52□□□□□ -0.56
APOBP04114 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
APOBP04114 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
APOBP04114 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOBP04114 ENSA-205ENST00000361532 792 ntTSL 2 BASIC11.52□□□□□ -0.57
APOBP04114 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.52□□□□□ -0.57
APOBP04114 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.52□□□□□ -0.57
APOBP04114 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC11.52□□□□□ -0.57
APOBP04114 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOBP04114 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.52□□□□□ -0.57
APOBP04114 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
APOBP04114 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOBP04114 IRX1P1-201ENST00000438849 1838 ntBASIC11.52□□□□□ -0.57
APOBP04114 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOBP04114 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC11.52□□□□□ -0.57
APOBP04114 AC068472.1-201ENST00000474589 881 ntBASIC11.52□□□□□ -0.57
APOBP04114 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
APOBP04114 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC11.52□□□□□ -0.57
APOBP04114 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC11.52□□□□□ -0.57
APOBP04114 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.52□□□□□ -0.57
APOBP04114 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.52□□□□□ -0.57
APOBP04114 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOBP04114 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOBP04114 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOBP04114 TCF3P1-201ENST00000423021 1937 ntBASIC11.52□□□□□ -0.57
APOBP04114 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOBP04114 AL356309.3-201ENST00000624132 1934 ntBASIC11.52□□□□□ -0.57
APOBP04114 TP73-202ENST00000354437 2140 ntTSL 5 BASIC11.52□□□□□ -0.57
APOBP04114 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOBP04114 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
APOBP04114 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
APOBP04114 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
APOBP04114 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.52□□□□□ -0.57
APOBP04114 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.52□□□□□ -0.57
APOBP04114 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC11.52□□□□□ -0.57
APOBP04114 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.52□□□□□ -0.57
APOBP04114 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.52□□□□□ -0.57
APOBP04114 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC11.52□□□□□ -0.57
APOBP04114 AC092865.6-201ENST00000642101 219 ntBASIC11.52□□□□□ -0.57
APOBP04114 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms