Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.53■□□□□ 0.08
ABCA1O95477 AL662844.1-201ENST00000546340 181 ntBASIC15.53■□□□□ 0.08
ABCA1O95477 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.53■□□□□ 0.08
ABCA1O95477 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
ABCA1O95477 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
ABCA1O95477 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ABCA1O95477 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
ABCA1O95477 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
ABCA1O95477 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.53■□□□□ 0.08
ABCA1O95477 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ABCA1O95477 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ABCA1O95477 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.52■□□□□ 0.08
ABCA1O95477 TOB2P1-201ENST00000469761 992 ntBASIC15.52■□□□□ 0.08
ABCA1O95477 AP000867.3-201ENST00000524675 377 ntBASIC15.52■□□□□ 0.08
ABCA1O95477 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ABCA1O95477 AC024243.1-201ENST00000609234 778 ntBASIC15.52■□□□□ 0.08
ABCA1O95477 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
ABCA1O95477 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
ABCA1O95477 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ABCA1O95477 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.52■□□□□ 0.08
ABCA1O95477 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
ABCA1O95477 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.52■□□□□ 0.08
ABCA1O95477 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.52■□□□□ 0.08
ABCA1O95477 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
ABCA1O95477 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ABCA1O95477 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ABCA1O95477 ZNF815P-204ENST00000434898 1737 ntBASIC15.52■□□□□ 0.08
ABCA1O95477 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
ABCA1O95477 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
ABCA1O95477 AC093484.2-201ENST00000580996 2166 ntBASIC15.52■□□□□ 0.08
ABCA1O95477 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ABCA1O95477 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ABCA1O95477 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ABCA1O95477 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ABCA1O95477 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.52■□□□□ 0.07
ABCA1O95477 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ABCA1O95477 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
ABCA1O95477 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ABCA1O95477 KRT16P4-201ENST00000453883 522 ntBASIC15.52■□□□□ 0.07
ABCA1O95477 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.52■□□□□ 0.07
ABCA1O95477 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.52■□□□□ 0.07
ABCA1O95477 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
ABCA1O95477 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
ABCA1O95477 AL136038.4-201ENST00000603606 1261 ntBASIC15.52■□□□□ 0.07
ABCA1O95477 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
ABCA1O95477 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ABCA1O95477 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.52■□□□□ 0.07
ABCA1O95477 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
ABCA1O95477 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
ABCA1O95477 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ABCA1O95477 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
ABCA1O95477 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.52■□□□□ 0.07
ABCA1O95477 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.51■□□□□ 0.07
ABCA1O95477 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ABCA1O95477 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ABCA1O95477 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ABCA1O95477 MRPL3P1-201ENST00000400109 1033 ntBASIC15.51■□□□□ 0.07
ABCA1O95477 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ABCA1O95477 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.51■□□□□ 0.07
ABCA1O95477 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.51■□□□□ 0.07
ABCA1O95477 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
ABCA1O95477 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ABCA1O95477 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ABCA1O95477 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ABCA1O95477 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ABCA1O95477 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.51■□□□□ 0.07
ABCA1O95477 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC15.51■□□□□ 0.07
ABCA1O95477 HLA-A-201ENST00000376802 1334 ntBASIC15.51■□□□□ 0.07
ABCA1O95477 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.51■□□□□ 0.07
ABCA1O95477 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ABCA1O95477 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ABCA1O95477 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.51■□□□□ 0.07
ABCA1O95477 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
ABCA1O95477 FZD10-202ENST00000539839 3282 ntBASIC15.51■□□□□ 0.07
ABCA1O95477 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ABCA1O95477 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.51■□□□□ 0.07
ABCA1O95477 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ABCA1O95477 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
ABCA1O95477 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
ABCA1O95477 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.51■□□□□ 0.07
ABCA1O95477 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.51■□□□□ 0.07
ABCA1O95477 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.51■□□□□ 0.07
ABCA1O95477 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.51■□□□□ 0.07
ABCA1O95477 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.51■□□□□ 0.07
ABCA1O95477 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.51■□□□□ 0.07
ABCA1O95477 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ABCA1O95477 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.51■□□□□ 0.07
ABCA1O95477 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ABCA1O95477 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ABCA1O95477 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.51■□□□□ 0.07
ABCA1O95477 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ABCA1O95477 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms