Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.56■■□□□ 1.04
CDKL5O76039 AL512604.3-201ENST00000569583 964 ntBASIC21.56■■□□□ 1.04
CDKL5O76039 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.56■■□□□ 1.04
CDKL5O76039 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.56■■□□□ 1.04
CDKL5O76039 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDKL5O76039 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
CDKL5O76039 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CDKL5O76039 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CDKL5O76039 NEFHP1-201ENST00000412845 2629 ntBASIC21.56■■□□□ 1.04
CDKL5O76039 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.56■■□□□ 1.04
CDKL5O76039 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDKL5O76039 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDKL5O76039 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDKL5O76039 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.55■■□□□ 1.04
CDKL5O76039 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.55■■□□□ 1.04
CDKL5O76039 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDKL5O76039 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDKL5O76039 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDKL5O76039 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDKL5O76039 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDKL5O76039 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.55■■□□□ 1.04
CDKL5O76039 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDKL5O76039 AC135050.7-201ENST00000624508 2218 ntBASIC21.55■■□□□ 1.04
CDKL5O76039 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.55■■□□□ 1.04
CDKL5O76039 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDKL5O76039 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDKL5O76039 KRT18P23-201ENST00000435622 1283 ntBASIC21.55■■□□□ 1.04
CDKL5O76039 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDKL5O76039 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
CDKL5O76039 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDKL5O76039 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.55■■□□□ 1.04
CDKL5O76039 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDKL5O76039 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDKL5O76039 BICD1-207ENST00000551848 1962 ntBASIC21.55■■□□□ 1.04
CDKL5O76039 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.55■■□□□ 1.04
CDKL5O76039 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDKL5O76039 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.55■■□□□ 1.04
CDKL5O76039 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.55■■□□□ 1.04
CDKL5O76039 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.55■■□□□ 1.04
CDKL5O76039 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDKL5O76039 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
CDKL5O76039 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CDKL5O76039 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKL5O76039 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.54■■□□□ 1.04
CDKL5O76039 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKL5O76039 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKL5O76039 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKL5O76039 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKL5O76039 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKL5O76039 INGX-201ENST00000359239 846 ntBASIC21.54■■□□□ 1.04
CDKL5O76039 HMGA1P5-201ENST00000412453 271 ntBASIC21.54■■□□□ 1.04
CDKL5O76039 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.54■■□□□ 1.04
CDKL5O76039 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CDKL5O76039 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CDKL5O76039 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.54■■□□□ 1.04
CDKL5O76039 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDKL5O76039 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.54■■□□□ 1.04
CDKL5O76039 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDKL5O76039 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.54■■□□□ 1.04
CDKL5O76039 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.54■■□□□ 1.04
CDKL5O76039 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDKL5O76039 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.53■■□□□ 1.04
CDKL5O76039 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.53■■□□□ 1.04
CDKL5O76039 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDKL5O76039 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CDKL5O76039 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDKL5O76039 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CDKL5O76039 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDKL5O76039 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDKL5O76039 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CDKL5O76039 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.53■■□□□ 1.04
CDKL5O76039 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.53■■□□□ 1.04
CDKL5O76039 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDKL5O76039 FAM87A-204ENST00000613235 858 ntBASIC21.53■■□□□ 1.04
CDKL5O76039 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDKL5O76039 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDKL5O76039 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDKL5O76039 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDKL5O76039 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.53■■□□□ 1.04
CDKL5O76039 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDKL5O76039 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDKL5O76039 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.52■■□□□ 1.04
CDKL5O76039 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKL5O76039 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDKL5O76039 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKL5O76039 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
CDKL5O76039 LINC01568-207ENST00000641790 1380 ntBASIC21.52■■□□□ 1.04
CDKL5O76039 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CDKL5O76039 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKL5O76039 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKL5O76039 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.52■■□□□ 1.04
CDKL5O76039 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.52■■□□□ 1.04
CDKL5O76039 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CDKL5O76039 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKL5O76039 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.52■■□□□ 1.04
CDKL5O76039 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CDKL5O76039 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDKL5O76039 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CDKL5O76039 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CDKL5O76039 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms