Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.19■□□□□ 0.18
UPK1BO75841 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
UPK1BO75841 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 TFP1-202ENST00000475455 1573 ntBASIC16.18■□□□□ 0.18
UPK1BO75841 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK1BO75841 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK1BO75841 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 MIR572-201ENST00000384983 95 ntBASIC16.18■□□□□ 0.18
UPK1BO75841 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.18■□□□□ 0.18
UPK1BO75841 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.18■□□□□ 0.18
UPK1BO75841 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.18■□□□□ 0.18
UPK1BO75841 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK1BO75841 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
UPK1BO75841 MIR4767-201ENST00000582827 78 ntBASIC16.18■□□□□ 0.18
UPK1BO75841 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
UPK1BO75841 AP001160.3-201ENST00000601484 763 ntBASIC16.18■□□□□ 0.18
UPK1BO75841 MYC-208ENST00000641036 567 ntBASIC16.18■□□□□ 0.18
UPK1BO75841 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
UPK1BO75841 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
UPK1BO75841 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
UPK1BO75841 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK1BO75841 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UPK1BO75841 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.18■□□□□ 0.18
UPK1BO75841 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.18■□□□□ 0.18
UPK1BO75841 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.18■□□□□ 0.18
UPK1BO75841 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.17■□□□□ 0.18
UPK1BO75841 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.17■□□□□ 0.18
UPK1BO75841 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.17■□□□□ 0.18
UPK1BO75841 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.17■□□□□ 0.18
UPK1BO75841 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.17■□□□□ 0.18
UPK1BO75841 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.17■□□□□ 0.18
UPK1BO75841 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
UPK1BO75841 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
UPK1BO75841 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.17■□□□□ 0.18
UPK1BO75841 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.17■□□□□ 0.18
UPK1BO75841 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.17■□□□□ 0.18
UPK1BO75841 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
UPK1BO75841 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.17■□□□□ 0.18
UPK1BO75841 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.17■□□□□ 0.18
UPK1BO75841 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UPK1BO75841 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
UPK1BO75841 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
UPK1BO75841 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
UPK1BO75841 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
UPK1BO75841 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
UPK1BO75841 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.17■□□□□ 0.18
UPK1BO75841 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.16■□□□□ 0.18
UPK1BO75841 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UPK1BO75841 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
UPK1BO75841 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.16■□□□□ 0.18
UPK1BO75841 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.16■□□□□ 0.18
UPK1BO75841 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UPK1BO75841 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
UPK1BO75841 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
UPK1BO75841 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms