Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TSPAN3O60637 AC099343.3-201ENST00000605834 2503 ntBASIC19.12■□□□□ 0.65
TSPAN3O60637 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.12■□□□□ 0.65
TSPAN3O60637 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN3O60637 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN3O60637 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TSPAN3O60637 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN3O60637 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN3O60637 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN3O60637 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TSPAN3O60637 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TSPAN3O60637 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.11■□□□□ 0.65
TSPAN3O60637 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
TSPAN3O60637 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN3O60637 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN3O60637 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.11■□□□□ 0.65
TSPAN3O60637 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TSPAN3O60637 AL136038.3-201ENST00000561909 1096 ntBASIC19.11■□□□□ 0.65
TSPAN3O60637 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN3O60637 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.11■□□□□ 0.65
TSPAN3O60637 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN3O60637 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN3O60637 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.11■□□□□ 0.65
TSPAN3O60637 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN3O60637 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TSPAN3O60637 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TSPAN3O60637 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.11■□□□□ 0.65
TSPAN3O60637 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TSPAN3O60637 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.11■□□□□ 0.65
TSPAN3O60637 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TSPAN3O60637 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TSPAN3O60637 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.1■□□□□ 0.65
TSPAN3O60637 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN3O60637 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN3O60637 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.1■□□□□ 0.65
TSPAN3O60637 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.1■□□□□ 0.65
TSPAN3O60637 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN3O60637 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.1■□□□□ 0.65
TSPAN3O60637 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.1■□□□□ 0.65
TSPAN3O60637 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN3O60637 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.1■□□□□ 0.65
TSPAN3O60637 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN3O60637 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.1■□□□□ 0.65
TSPAN3O60637 AC093458.2-201ENST00000623150 629 ntBASIC19.1■□□□□ 0.65
TSPAN3O60637 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN3O60637 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN3O60637 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN3O60637 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
TSPAN3O60637 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TSPAN3O60637 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN3O60637 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN3O60637 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
TSPAN3O60637 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN3O60637 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN3O60637 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TSPAN3O60637 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TSPAN3O60637 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TSPAN3O60637 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.09■□□□□ 0.65
TSPAN3O60637 AL391807.1-203ENST00000604392 2365 ntBASIC19.09■□□□□ 0.65
TSPAN3O60637 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.09■□□□□ 0.65
TSPAN3O60637 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.09■□□□□ 0.65
TSPAN3O60637 AL136038.4-201ENST00000603606 1261 ntBASIC19.09■□□□□ 0.65
TSPAN3O60637 AC116407.4-201ENST00000623319 1061 ntBASIC19.09■□□□□ 0.65
TSPAN3O60637 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.09■□□□□ 0.65
TSPAN3O60637 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.09■□□□□ 0.65
TSPAN3O60637 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.09■□□□□ 0.65
TSPAN3O60637 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.09■□□□□ 0.65
TSPAN3O60637 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.09■□□□□ 0.65
TSPAN3O60637 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.09■□□□□ 0.65
TSPAN3O60637 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TSPAN3O60637 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TSPAN3O60637 KRT8P50-201ENST00000562022 1438 ntBASIC19.08■□□□□ 0.65
TSPAN3O60637 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TSPAN3O60637 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TSPAN3O60637 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
TSPAN3O60637 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TSPAN3O60637 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TSPAN3O60637 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TSPAN3O60637 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.08■□□□□ 0.64
TSPAN3O60637 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms