Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.82■□□□□ 0.12
SSNA1O43805 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.82■□□□□ 0.12
SSNA1O43805 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SSNA1O43805 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.82■□□□□ 0.12
SSNA1O43805 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.82■□□□□ 0.12
SSNA1O43805 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.82■□□□□ 0.12
SSNA1O43805 YBX1P1-201ENST00000445822 960 ntBASIC15.82■□□□□ 0.12
SSNA1O43805 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC15.82■□□□□ 0.12
SSNA1O43805 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.82■□□□□ 0.12
SSNA1O43805 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.82■□□□□ 0.12
SSNA1O43805 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC15.82■□□□□ 0.12
SSNA1O43805 AC104187.1-201ENST00000607510 612 ntBASIC15.82■□□□□ 0.12
SSNA1O43805 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
SSNA1O43805 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SSNA1O43805 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SSNA1O43805 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.82■□□□□ 0.12
SSNA1O43805 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.82■□□□□ 0.12
SSNA1O43805 ANKRD18DP-204ENST00000455355 1975 ntBASIC15.82■□□□□ 0.12
SSNA1O43805 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SSNA1O43805 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSNA1O43805 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.82■□□□□ 0.12
SSNA1O43805 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.81■□□□□ 0.12
SSNA1O43805 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.81■□□□□ 0.12
SSNA1O43805 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
SSNA1O43805 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.81■□□□□ 0.12
SSNA1O43805 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.81■□□□□ 0.12
SSNA1O43805 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.81■□□□□ 0.12
SSNA1O43805 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.81■□□□□ 0.12
SSNA1O43805 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.81■□□□□ 0.12
SSNA1O43805 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.81■□□□□ 0.12
SSNA1O43805 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SSNA1O43805 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.8■□□□□ 0.12
SSNA1O43805 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SSNA1O43805 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SSNA1O43805 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.8■□□□□ 0.12
SSNA1O43805 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.8■□□□□ 0.12
SSNA1O43805 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SSNA1O43805 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
SSNA1O43805 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.8■□□□□ 0.12
SSNA1O43805 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SSNA1O43805 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 AC116351.2-201ENST00000606540 1585 ntBASIC15.8■□□□□ 0.12
SSNA1O43805 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SSNA1O43805 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SSNA1O43805 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.8■□□□□ 0.12
SSNA1O43805 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SSNA1O43805 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SSNA1O43805 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SSNA1O43805 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.8■□□□□ 0.12
SSNA1O43805 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.8■□□□□ 0.12
SSNA1O43805 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SSNA1O43805 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SSNA1O43805 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms