Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 AC018470.1-201ENST00000624790 3129 ntBASIC16.14■□□□□ 0.17
XRCC2O43543 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.14■□□□□ 0.17
XRCC2O43543 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.14■□□□□ 0.17
XRCC2O43543 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.14■□□□□ 0.17
XRCC2O43543 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.14■□□□□ 0.17
XRCC2O43543 AL023284.2-201ENST00000405850 579 ntBASIC16.14■□□□□ 0.17
XRCC2O43543 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
XRCC2O43543 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.14■□□□□ 0.17
XRCC2O43543 TSPY7P-201ENST00000431358 1114 ntBASIC16.14■□□□□ 0.17
XRCC2O43543 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 RBM17P1-201ENST00000453646 1190 ntBASIC16.14■□□□□ 0.17
XRCC2O43543 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
XRCC2O43543 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.14■□□□□ 0.17
XRCC2O43543 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.14■□□□□ 0.17
XRCC2O43543 AC008622.2-201ENST00000617006 1229 ntBASIC16.14■□□□□ 0.17
XRCC2O43543 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
XRCC2O43543 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.14■□□□□ 0.17
XRCC2O43543 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.14■□□□□ 0.17
XRCC2O43543 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC2O43543 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC2O43543 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
XRCC2O43543 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
XRCC2O43543 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC2O43543 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC2O43543 AC104581.1-202ENST00000635932 2618 ntBASIC16.13■□□□□ 0.17
XRCC2O43543 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.13■□□□□ 0.17
XRCC2O43543 SLC25A1P2-201ENST00000430693 912 ntBASIC16.13■□□□□ 0.17
XRCC2O43543 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC2O43543 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC2O43543 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.13■□□□□ 0.17
XRCC2O43543 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC2O43543 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC2O43543 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC2O43543 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
XRCC2O43543 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.13■□□□□ 0.17
XRCC2O43543 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC2O43543 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.13■□□□□ 0.17
XRCC2O43543 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC2O43543 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC2O43543 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC2O43543 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.13■□□□□ 0.17
XRCC2O43543 AC009113.1-201ENST00000570267 2443 ntBASIC16.13■□□□□ 0.17
XRCC2O43543 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC2O43543 AC008556.1-201ENST00000610908 2040 ntBASIC16.12■□□□□ 0.17
XRCC2O43543 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.12■□□□□ 0.17
XRCC2O43543 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.12■□□□□ 0.17
XRCC2O43543 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.12■□□□□ 0.17
XRCC2O43543 GPAT2P1-201ENST00000444924 1672 ntBASIC16.12■□□□□ 0.17
XRCC2O43543 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.12■□□□□ 0.17
XRCC2O43543 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
XRCC2O43543 AC079598.2-202ENST00000546624 1451 ntBASIC16.12■□□□□ 0.17
XRCC2O43543 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.12■□□□□ 0.17
XRCC2O43543 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.12■□□□□ 0.17
XRCC2O43543 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.12■□□□□ 0.17
XRCC2O43543 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
XRCC2O43543 AP000593.1-201ENST00000393668 712 ntBASIC16.12■□□□□ 0.17
XRCC2O43543 KRT18P41-201ENST00000518924 1277 ntBASIC16.12■□□□□ 0.17
XRCC2O43543 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.12■□□□□ 0.17
XRCC2O43543 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.12■□□□□ 0.17
XRCC2O43543 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.12■□□□□ 0.17
XRCC2O43543 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
XRCC2O43543 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.12■□□□□ 0.17
XRCC2O43543 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.12■□□□□ 0.17
XRCC2O43543 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.12■□□□□ 0.17
XRCC2O43543 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
XRCC2O43543 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC2O43543 AC126763.1-201ENST00000552015 2118 ntBASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms