Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.7■□□□□ 0.58
NPC1O15118 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NPC1O15118 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NPC1O15118 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.69■□□□□ 0.58
NPC1O15118 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NPC1O15118 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 GUSBP12-201ENST00000513727 720 ntBASIC18.69■□□□□ 0.58
NPC1O15118 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.69■□□□□ 0.58
NPC1O15118 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 IGHV3-41-201ENST00000613121 348 ntBASIC18.69■□□□□ 0.58
NPC1O15118 AC083906.6-201ENST00000641366 219 ntBASIC18.69■□□□□ 0.58
NPC1O15118 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NPC1O15118 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.69■□□□□ 0.58
NPC1O15118 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.69■□□□□ 0.58
NPC1O15118 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.69■□□□□ 0.58
NPC1O15118 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NPC1O15118 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
NPC1O15118 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NPC1O15118 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.68■□□□□ 0.58
NPC1O15118 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.68■□□□□ 0.58
NPC1O15118 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.68■□□□□ 0.58
NPC1O15118 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPC1O15118 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPC1O15118 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPC1O15118 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPC1O15118 AC004870.1-201ENST00000315132 882 ntBASIC18.68■□□□□ 0.58
NPC1O15118 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.68■□□□□ 0.58
NPC1O15118 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPC1O15118 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPC1O15118 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPC1O15118 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.68■□□□□ 0.58
NPC1O15118 LINC00265-3P-201ENST00000447588 903 ntBASIC18.68■□□□□ 0.58
NPC1O15118 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.68■□□□□ 0.58
NPC1O15118 AL121772.3-201ENST00000610840 674 ntBASIC18.68■□□□□ 0.58
NPC1O15118 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPC1O15118 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPC1O15118 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.68■□□□□ 0.58
NPC1O15118 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NPC1O15118 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.68■□□□□ 0.58
NPC1O15118 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPC1O15118 AL163051.1-201ENST00000569214 1512 ntBASIC18.68■□□□□ 0.58
NPC1O15118 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NPC1O15118 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NPC1O15118 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPC1O15118 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
NPC1O15118 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NPC1O15118 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPC1O15118 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPC1O15118 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPC1O15118 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPC1O15118 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPC1O15118 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPC1O15118 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPC1O15118 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NPC1O15118 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPC1O15118 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPC1O15118 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPC1O15118 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPC1O15118 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.67■□□□□ 0.58
NPC1O15118 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.67■□□□□ 0.58
NPC1O15118 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
NPC1O15118 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NPC1O15118 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
NPC1O15118 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.67■□□□□ 0.58
NPC1O15118 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.67■□□□□ 0.58
NPC1O15118 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.67■□□□□ 0.58
NPC1O15118 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.67■□□□□ 0.58
NPC1O15118 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.67■□□□□ 0.58
NPC1O15118 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPC1O15118 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPC1O15118 MTMR9LP-203ENST00000426597 1545 ntBASIC18.67■□□□□ 0.58
NPC1O15118 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPC1O15118 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.67■□□□□ 0.58
NPC1O15118 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
NPC1O15118 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPC1O15118 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.67■□□□□ 0.58
NPC1O15118 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.67■□□□□ 0.58
NPC1O15118 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPC1O15118 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NPC1O15118 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NPC1O15118 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPC1O15118 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NPC1O15118 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
NPC1O15118 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPC1O15118 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NPC1O15118 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms