Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 NTF6B-201ENST00000591913 560 ntBASIC17.72■□□□□ 0.43
PCDH17O14917 AC006011.2-201ENST00000621313 1158 ntBASIC17.72■□□□□ 0.43
PCDH17O14917 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH17O14917 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.72■□□□□ 0.43
PCDH17O14917 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PCDH17O14917 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH17O14917 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH17O14917 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH17O14917 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH17O14917 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDH17O14917 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PCDH17O14917 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PCDH17O14917 KRT8P3-201ENST00000519669 1449 ntBASIC17.72■□□□□ 0.43
PCDH17O14917 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH17O14917 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH17O14917 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH17O14917 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH17O14917 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
PCDH17O14917 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH17O14917 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
PCDH17O14917 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH17O14917 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH17O14917 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH17O14917 FAM8A6P-201ENST00000407496 1135 ntBASIC17.71■□□□□ 0.43
PCDH17O14917 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDH17O14917 WWOX-216ENST00000569818 525 ntBASIC17.71■□□□□ 0.43
PCDH17O14917 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDH17O14917 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH17O14917 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
PCDH17O14917 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCDH17O14917 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
PCDH17O14917 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH17O14917 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH17O14917 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDH17O14917 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.71■□□□□ 0.42
PCDH17O14917 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.71■□□□□ 0.42
PCDH17O14917 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH17O14917 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDH17O14917 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH17O14917 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDH17O14917 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDH17O14917 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDH17O14917 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH17O14917 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDH17O14917 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.7■□□□□ 0.42
PCDH17O14917 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDH17O14917 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDH17O14917 Z98044.1-201ENST00000632503 1764 ntBASIC17.7■□□□□ 0.42
PCDH17O14917 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH17O14917 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 AC093525.10-201ENST00000625130 1569 ntBASIC17.7■□□□□ 0.42
PCDH17O14917 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH17O14917 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH17O14917 AC090164.3-201ENST00000610780 2143 ntBASIC17.69■□□□□ 0.42
PCDH17O14917 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDH17O14917 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 TSPY5P-201ENST00000426936 936 ntBASIC17.69■□□□□ 0.42
PCDH17O14917 AC117947.1-201ENST00000427448 529 ntBASIC17.69■□□□□ 0.42
PCDH17O14917 YBX1P2-201ENST00000489612 999 ntBASIC17.69■□□□□ 0.42
PCDH17O14917 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDH17O14917 AC022616.7-201ENST00000525383 220 ntBASIC17.69■□□□□ 0.42
PCDH17O14917 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDH17O14917 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDH17O14917 AC140113.3-201ENST00000605663 199 ntBASIC17.69■□□□□ 0.42
PCDH17O14917 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PCDH17O14917 AC135050.7-201ENST00000624508 2218 ntBASIC17.69■□□□□ 0.42
PCDH17O14917 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 IRX1P1-201ENST00000438849 1838 ntBASIC17.69■□□□□ 0.42
PCDH17O14917 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCDH17O14917 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDH17O14917 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH17O14917 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
PCDH17O14917 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH17O14917 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms