Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.69■□□□□ 0.74
SOX1O00570 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.69■□□□□ 0.74
SOX1O00570 MIR3180-4-201ENST00000582223 153 ntBASIC19.69■□□□□ 0.74
SOX1O00570 NKAPP1-205ENST00000585790 367 ntBASIC19.69■□□□□ 0.74
SOX1O00570 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.69■□□□□ 0.74
SOX1O00570 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.69■□□□□ 0.74
SOX1O00570 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.69■□□□□ 0.74
SOX1O00570 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.69■□□□□ 0.74
SOX1O00570 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.69■□□□□ 0.74
SOX1O00570 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SOX1O00570 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SOX1O00570 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SOX1O00570 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX1O00570 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX1O00570 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SOX1O00570 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX1O00570 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX1O00570 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.68■□□□□ 0.74
SOX1O00570 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC19.68■□□□□ 0.74
SOX1O00570 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.68■□□□□ 0.74
SOX1O00570 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.68■□□□□ 0.74
SOX1O00570 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.68■□□□□ 0.74
SOX1O00570 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.68■□□□□ 0.74
SOX1O00570 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.68■□□□□ 0.74
SOX1O00570 AL139288.1-201ENST00000623748 933 ntBASIC19.68■□□□□ 0.74
SOX1O00570 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SOX1O00570 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SOX1O00570 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX1O00570 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SOX1O00570 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SOX1O00570 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX1O00570 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SOX1O00570 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SOX1O00570 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX1O00570 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX1O00570 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.68■□□□□ 0.74
SOX1O00570 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX1O00570 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SOX1O00570 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SOX1O00570 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOX1O00570 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOX1O00570 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SOX1O00570 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOX1O00570 MKNK2P1-201ENST00000437526 628 ntBASIC19.67■□□□□ 0.74
SOX1O00570 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.67■□□□□ 0.74
SOX1O00570 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SOX1O00570 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SOX1O00570 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SOX1O00570 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOX1O00570 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SOX1O00570 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SOX1O00570 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SOX1O00570 EP400NL-214ENST00000641289 2402 ntBASIC19.66■□□□□ 0.74
SOX1O00570 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SOX1O00570 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SOX1O00570 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX1O00570 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SOX1O00570 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.66■□□□□ 0.74
SOX1O00570 MRPL20P1-201ENST00000400819 433 ntBASIC19.66■□□□□ 0.74
SOX1O00570 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SOX1O00570 AC108751.1-201ENST00000490852 363 ntBASIC19.66■□□□□ 0.74
SOX1O00570 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SOX1O00570 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SOX1O00570 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.66■□□□□ 0.74
SOX1O00570 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.66■□□□□ 0.74
SOX1O00570 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.66■□□□□ 0.74
SOX1O00570 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX1O00570 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX1O00570 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SOX1O00570 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SOX1O00570 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
SOX1O00570 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX1O00570 SDHAP1-207ENST00000440850 2000 ntBASIC19.66■□□□□ 0.74
SOX1O00570 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SOX1O00570 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SOX1O00570 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SOX1O00570 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SOX1O00570 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX1O00570 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX1O00570 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.65■□□□□ 0.74
SOX1O00570 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.65■□□□□ 0.74
SOX1O00570 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.65■□□□□ 0.74
SOX1O00570 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX1O00570 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.65■□□□□ 0.74
SOX1O00570 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.65■□□□□ 0.74
SOX1O00570 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.65■□□□□ 0.74
SOX1O00570 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.65■□□□□ 0.74
SOX1O00570 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.65■□□□□ 0.74
SOX1O00570 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX1O00570 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.65■□□□□ 0.74
SOX1O00570 AC004449.1-201ENST00000564240 433 ntBASIC19.65■□□□□ 0.74
SOX1O00570 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.65■□□□□ 0.74
SOX1O00570 AL031432.2-201ENST00000566714 459 ntBASIC19.65■□□□□ 0.74
SOX1O00570 AL928711.1-201ENST00000570165 459 ntBASIC19.65■□□□□ 0.74
SOX1O00570 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.65■□□□□ 0.74
SOX1O00570 AL513190.1-201ENST00000621254 727 ntBASIC19.65■□□□□ 0.74
SOX1O00570 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SOX1O00570 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SOX1O00570 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SOX1O00570 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms