Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 AC011506.1-201ENST00000474329 610 ntBASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 RARRES2P10-201ENST00000564312 460 ntBASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 AL359736.2-201ENST00000621992 437 ntBASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CPSF4LA6NMK7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CPSF4LA6NMK7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 MIR6786-201ENST00000616843 113 ntBASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 AC130371.2-201ENST00000619443 611 ntBASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPSF4LA6NMK7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 FAM201B-201ENST00000458407 597 ntBASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 B3GAT3P1-201ENST00000471720 806 ntBASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 MYC-208ENST00000641036 567 ntBASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 AC112777.1-201ENST00000540175 1423 ntBASIC17.13■□□□□ 0.33
CPSF4LA6NMK7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPSF4LA6NMK7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.12■□□□□ 0.33
CPSF4LA6NMK7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CPSF4LA6NMK7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.12■□□□□ 0.33
CPSF4LA6NMK7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPSF4LA6NMK7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPSF4LA6NMK7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.12■□□□□ 0.33
CPSF4LA6NMK7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms