Protein–RNA interactions for Protein: A6NGH7

CCDC160, Coiled-coil domain-containing protein 160, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC160A6NGH7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC160A6NGH7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC160A6NGH7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC160A6NGH7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
CCDC160A6NGH7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC160A6NGH7 MIR600HG-201ENST00000449175 5984 ntBASIC17.26■□□□□ 0.35
CCDC160A6NGH7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC160A6NGH7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC160A6NGH7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC160A6NGH7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC160A6NGH7 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 AC138028.4-201ENST00000564984 1845 ntBASIC17.25■□□□□ 0.35
CCDC160A6NGH7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC160A6NGH7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 AL138724.1-201ENST00000606771 1088 ntBASIC17.24■□□□□ 0.35
CCDC160A6NGH7 AC083906.6-201ENST00000641366 219 ntBASIC17.24■□□□□ 0.35
CCDC160A6NGH7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC160A6NGH7 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC160A6NGH7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms