Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 AC009065.1-201ENST00000564055 1225 ntBASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 MIR3180-1-201ENST00000580374 94 ntBASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 MIR3180-3-201ENST00000584616 94 ntBASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 Z83836.1-201ENST00000624605 1642 ntBASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.47■□□□□ 0.55
TBC1D3FA6NER0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 TPM4P1-201ENST00000436100 807 ntBASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 AC005332.3-201ENST00000589904 676 ntBASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 AL691432.3-201ENST00000621860 400 ntBASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TBC1D3FA6NER0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TBC1D3FA6NER0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
TBC1D3FA6NER0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 AL161938.1-201ENST00000569833 2180 ntBASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TBC1D3FA6NER0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TBC1D3FA6NER0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms