Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 MYLKP1-201ENST00000509077 1580 ntBASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRDV1A0A1B0GX56 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 PP12613-201ENST00000424958 2230 ntBASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 AC106820.2-201ENST00000563775 3264 ntBASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRDV1A0A1B0GX56 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 AC006116.8-202ENST00000587620 1550 ntBASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 KRT8P3-201ENST00000519669 1449 ntBASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 AL121832.2-201ENST00000610979 668 ntBASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRDV1A0A1B0GX56 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.3■□□□□ 0.2
TRDV1A0A1B0GX56 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRDV1A0A1B0GX56 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.3■□□□□ 0.2
TRDV1A0A1B0GX56 AL096828.2-201ENST00000567259 1965 ntBASIC16.3■□□□□ 0.2
TRDV1A0A1B0GX56 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRDV1A0A1B0GX56 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.3■□□□□ 0.2
TRDV1A0A1B0GX56 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRDV1A0A1B0GX56 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRDV1A0A1B0GX56 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRDV1A0A1B0GX56 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRDV1A0A1B0GX56 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.3■□□□□ 0.2
TRDV1A0A1B0GX56 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.3■□□□□ 0.2
TRDV1A0A1B0GX56 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.3■□□□□ 0.2
TRDV1A0A1B0GX56 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms