Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC13.12□□□□□ -0.31
TRBV6-4A0A1B0GX49 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 TSPY17P-201ENST00000450329 467 ntBASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 KRT17P2-201ENST00000300992 1314 ntBASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRBV6-4A0A1B0GX49 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 CCR12P-201ENST00000446203 998 ntBASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 AL354751.1-201ENST00000412768 1863 ntBASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.1□□□□□ -0.31
TRBV6-4A0A1B0GX49 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 ABALON-201ENST00000629058 1903 ntBASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 RBM17P1-201ENST00000453646 1190 ntBASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
TRBV6-4A0A1B0GX49 KRT8P7-201ENST00000533003 1432 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms