Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
DNMT3AQ9Y6K1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.2■□□□□ 0.5
DNMT3AQ9Y6K1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DNMT3AQ9Y6K1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.2■□□□□ 0.5
DNMT3AQ9Y6K1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DNMT3AQ9Y6K1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.2■□□□□ 0.5
DNMT3AQ9Y6K1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
DNMT3AQ9Y6K1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
DNMT3AQ9Y6K1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
DNMT3AQ9Y6K1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.2■□□□□ 0.5
DNMT3AQ9Y6K1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DNMT3AQ9Y6K1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 AL031598.1-201ENST00000561511 1773 ntBASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
DNMT3AQ9Y6K1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 NTF6B-201ENST00000591913 560 ntBASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DNMT3AQ9Y6K1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 CROCCP3-202ENST00000420820 1947 ntBASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 ANO7L1-203ENST00000602586 1720 ntBASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 AL163051.1-201ENST00000569214 1512 ntBASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 MYLKP1-201ENST00000509077 1580 ntBASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.17■□□□□ 0.5
DNMT3AQ9Y6K1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
DNMT3AQ9Y6K1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms