Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 AC006333.2-201ENST00000607957 2099 ntBASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 KRT8P32-201ENST00000512863 1461 ntBASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 AL023973.1-201ENST00000624619 620 ntBASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HRH3Q9Y5N1 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 AC008556.1-201ENST00000610908 2040 ntBASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 UPK3BP1-201ENST00000428678 509 ntBASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 NEFHP1-201ENST00000412845 2629 ntBASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.13■□□□□ 0.33
HRH3Q9Y5N1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 FAM86EP-206ENST00000510506 987 ntBASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 AC091076.1-201ENST00000610741 619 ntBASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 AC068587.9-201ENST00000641814 219 ntBASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 AP000974.1-201ENST00000623909 2387 ntBASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.12■□□□□ 0.33
HRH3Q9Y5N1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms