Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF6Q9Y252 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF6Q9Y252 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF6Q9Y252 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 AC010947.1-201ENST00000623454 693 ntBASIC17.51■□□□□ 0.39
RNF6Q9Y252 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RNF6Q9Y252 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 AP006587.1-201ENST00000534129 1502 ntBASIC17.51■□□□□ 0.39
RNF6Q9Y252 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF6Q9Y252 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF6Q9Y252 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF6Q9Y252 SDHAP1-207ENST00000440850 2000 ntBASIC17.5■□□□□ 0.39
RNF6Q9Y252 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 KRT18P57-201ENST00000443599 1254 ntBASIC17.5■□□□□ 0.39
RNF6Q9Y252 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 AL031985.4-201ENST00000642138 673 ntBASIC17.5■□□□□ 0.39
RNF6Q9Y252 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF6Q9Y252 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
RNF6Q9Y252 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
RNF6Q9Y252 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
RNF6Q9Y252 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF6Q9Y252 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF6Q9Y252 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF6Q9Y252 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF6Q9Y252 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF6Q9Y252 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF6Q9Y252 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.49■□□□□ 0.39
RNF6Q9Y252 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF6Q9Y252 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.49■□□□□ 0.39
RNF6Q9Y252 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.49■□□□□ 0.39
RNF6Q9Y252 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF6Q9Y252 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF6Q9Y252 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF6Q9Y252 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RNF6Q9Y252 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF6Q9Y252 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF6Q9Y252 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF6Q9Y252 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF6Q9Y252 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF6Q9Y252 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RNF6Q9Y252 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RNF6Q9Y252 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RNF6Q9Y252 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF6Q9Y252 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF6Q9Y252 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF6Q9Y252 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF6Q9Y252 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF6Q9Y252 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF6Q9Y252 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF6Q9Y252 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RNF6Q9Y252 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF6Q9Y252 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF6Q9Y252 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms