Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 ATP5G2P1-201ENST00000433580 426 ntBASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.98■□□□□ 0.95
HDAC6Q9UBN7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 AC034232.1-201ENST00000506026 1064 ntBASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 AC012313.10-201ENST00000623509 926 ntBASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HDAC6Q9UBN7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 AL645929.1-201ENST00000420084 975 ntBASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC6Q9UBN7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
HDAC6Q9UBN7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.95■□□□□ 0.94
HDAC6Q9UBN7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.95■□□□□ 0.94
HDAC6Q9UBN7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC6Q9UBN7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.95■□□□□ 0.94
HDAC6Q9UBN7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.95■□□□□ 0.94
HDAC6Q9UBN7 NPAP1P7-201ENST00000613027 823 ntBASIC20.95■□□□□ 0.94
HDAC6Q9UBN7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.95■□□□□ 0.94
HDAC6Q9UBN7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.95■□□□□ 0.94
HDAC6Q9UBN7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC6Q9UBN7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC6Q9UBN7 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.95■□□□□ 0.94
HDAC6Q9UBN7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC6Q9UBN7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC6Q9UBN7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.95■□□□□ 0.94
HDAC6Q9UBN7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 TPM4P1-201ENST00000436100 807 ntBASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 MCCD1P1-208ENST00000445732 328 ntBASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 MIR3180-5-201ENST00000583743 153 ntBASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC6Q9UBN7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms