Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.36■□□□□ 0.69
DNMT3BQ9UBC3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3BQ9UBC3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3BQ9UBC3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3BQ9UBC3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.36■□□□□ 0.69
DNMT3BQ9UBC3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3BQ9UBC3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.36■□□□□ 0.69
DNMT3BQ9UBC3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
DNMT3BQ9UBC3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.36■□□□□ 0.69
DNMT3BQ9UBC3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 LINC00167-201ENST00000530583 1419 ntBASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 AL020996.1-203ENST00000536896 2307 ntBASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
DNMT3BQ9UBC3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 AC138894.3-201ENST00000603787 634 ntBASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 Z98044.1-201ENST00000632503 1764 ntBASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 AC005332.7-201ENST00000614046 2005 ntBASIC19.34■□□□□ 0.69
DNMT3BQ9UBC3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DNMT3BQ9UBC3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DNMT3BQ9UBC3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DNMT3BQ9UBC3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DNMT3BQ9UBC3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.33■□□□□ 0.69
DNMT3BQ9UBC3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
DNMT3BQ9UBC3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
DNMT3BQ9UBC3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 RN7SL606P-201ENST00000472779 293 ntBASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 AL160237.2-201ENST00000556165 472 ntBASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 LINC01711-201ENST00000598340 967 ntBASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 AL592071.1-201ENST00000611956 408 ntBASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 AC124864.1-201ENST00000623408 392 ntBASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
DNMT3BQ9UBC3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 IGHV3-47-201ENST00000425060 335 ntBASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.32■□□□□ 0.68
DNMT3BQ9UBC3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms