Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 AC133681.1-201ENST00000465482 601 ntBASIC17.59■□□□□ 0.41
VAPAQ9P0L0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.59■□□□□ 0.41
VAPAQ9P0L0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 REXO1L9P-201ENST00000604264 2108 ntBASIC17.59■□□□□ 0.41
VAPAQ9P0L0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.59■□□□□ 0.41
VAPAQ9P0L0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.58■□□□□ 0.41
VAPAQ9P0L0 MYLKP1-201ENST00000509077 1580 ntBASIC17.58■□□□□ 0.41
VAPAQ9P0L0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VAPAQ9P0L0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VAPAQ9P0L0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VAPAQ9P0L0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
VAPAQ9P0L0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VAPAQ9P0L0 HTR7P1-201ENST00000538670 1336 ntBASIC17.58■□□□□ 0.4
VAPAQ9P0L0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 HLA-L-209ENST00000420110 1011 ntBASIC17.58■□□□□ 0.4
VAPAQ9P0L0 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.58■□□□□ 0.4
VAPAQ9P0L0 RPS2P4-201ENST00000476944 856 ntBASIC17.58■□□□□ 0.4
VAPAQ9P0L0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 AC110285.5-201ENST00000611501 352 ntBASIC17.58■□□□□ 0.4
VAPAQ9P0L0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
VAPAQ9P0L0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 AC004951.3-201ENST00000418645 1148 ntBASIC17.57■□□□□ 0.4
VAPAQ9P0L0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 AC092666.2-201ENST00000613287 246 ntBASIC17.57■□□□□ 0.4
VAPAQ9P0L0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 LINC00896-202ENST00000609602 2128 ntBASIC17.57■□□□□ 0.4
VAPAQ9P0L0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.57■□□□□ 0.4
VAPAQ9P0L0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VAPAQ9P0L0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.56■□□□□ 0.4
VAPAQ9P0L0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.56■□□□□ 0.4
VAPAQ9P0L0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VAPAQ9P0L0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VAPAQ9P0L0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VAPAQ9P0L0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.56■□□□□ 0.4
VAPAQ9P0L0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VAPAQ9P0L0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.56■□□□□ 0.4
VAPAQ9P0L0 AC020916.1-201ENST00000587762 1774 ntBASIC17.56■□□□□ 0.4
VAPAQ9P0L0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VAPAQ9P0L0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VAPAQ9P0L0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VAPAQ9P0L0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VAPAQ9P0L0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms