Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.36■□□□□ 0.53
MKS1Q9NXB0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 AP003097.1-201ENST00000530657 1135 ntBASIC18.36■□□□□ 0.53
MKS1Q9NXB0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 AL096828.2-201ENST00000567259 1965 ntBASIC18.36■□□□□ 0.53
MKS1Q9NXB0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.36■□□□□ 0.53
MKS1Q9NXB0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MKS1Q9NXB0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 AC004951.3-201ENST00000418645 1148 ntBASIC18.35■□□□□ 0.53
MKS1Q9NXB0 KRT17P3-201ENST00000420566 1262 ntBASIC18.35■□□□□ 0.53
MKS1Q9NXB0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 AL353708.3-201ENST00000610272 989 ntBASIC18.35■□□□□ 0.53
MKS1Q9NXB0 AL109923.1-201ENST00000618799 583 ntBASIC18.35■□□□□ 0.53
MKS1Q9NXB0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MKS1Q9NXB0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 KRASP1-201ENST00000407852 552 ntBASIC18.34■□□□□ 0.53
MKS1Q9NXB0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 AC239809.2-201ENST00000415381 517 ntBASIC18.34■□□□□ 0.53
MKS1Q9NXB0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 GMCL1P1-201ENST00000463439 1581 ntBASIC18.34■□□□□ 0.53
MKS1Q9NXB0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
MKS1Q9NXB0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MKS1Q9NXB0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MKS1Q9NXB0 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
MKS1Q9NXB0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
MKS1Q9NXB0 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.33■□□□□ 0.53
MKS1Q9NXB0 AC012317.2-201ENST00000623305 2251 ntBASIC18.33■□□□□ 0.53
MKS1Q9NXB0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
MKS1Q9NXB0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
MKS1Q9NXB0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MKS1Q9NXB0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
MKS1Q9NXB0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MKS1Q9NXB0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.33■□□□□ 0.52
MKS1Q9NXB0 AC026271.3-201ENST00000571884 352 ntBASIC18.33■□□□□ 0.52
MKS1Q9NXB0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
MKS1Q9NXB0 AC233263.1-201ENST00000578059 224 ntBASIC18.33■□□□□ 0.52
MKS1Q9NXB0 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.33■□□□□ 0.52
MKS1Q9NXB0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.33■□□□□ 0.52
MKS1Q9NXB0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
MKS1Q9NXB0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.33■□□□□ 0.52
MKS1Q9NXB0 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MKS1Q9NXB0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms