Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBQLN4Q9NRR5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBQLN4Q9NRR5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 KRT18P23-201ENST00000435622 1283 ntBASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 AC133561.5-201ENST00000635547 218 ntBASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UBQLN4Q9NRR5 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 KRT8P50-201ENST00000562022 1438 ntBASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.05■□□□□ 0.32
UBQLN4Q9NRR5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms