Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB16Q9NRJ7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 KRT18P6-201ENST00000555540 1265 ntBASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
PCDHB16Q9NRJ7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHB16Q9NRJ7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHB16Q9NRJ7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHB16Q9NRJ7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.18
PCDHB16Q9NRJ7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 AL391005.1-201ENST00000623953 2435 ntBASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHB16Q9NRJ7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms