Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 AC097374.2-201ENST00000618617 1306 ntBASIC17.22■□□□□ 0.35
CHD8Q9HCK8 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 PMS2P4-201ENST00000412466 1052 ntBASIC17.22■□□□□ 0.35
CHD8Q9HCK8 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 AP005018.1-201ENST00000525475 301 ntBASIC17.22■□□□□ 0.35
CHD8Q9HCK8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CHD8Q9HCK8 AC008556.1-201ENST00000610908 2040 ntBASIC17.22■□□□□ 0.35
CHD8Q9HCK8 AL391422.3-201ENST00000603791 2761 ntBASIC17.21■□□□□ 0.35
CHD8Q9HCK8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 AC004449.1-201ENST00000564240 433 ntBASIC17.21■□□□□ 0.35
CHD8Q9HCK8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 MIR6799-201ENST00000620297 69 ntBASIC17.21■□□□□ 0.35
CHD8Q9HCK8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.21■□□□□ 0.35
CHD8Q9HCK8 NKAPP1-205ENST00000585790 367 ntBASIC17.21■□□□□ 0.35
CHD8Q9HCK8 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.21■□□□□ 0.35
CHD8Q9HCK8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 AC092720.2-201ENST00000602388 1665 ntBASIC17.2■□□□□ 0.34
CHD8Q9HCK8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 AP000344.2-201ENST00000512987 629 ntBASIC17.2■□□□□ 0.34
CHD8Q9HCK8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 MIR3180-4-201ENST00000582223 153 ntBASIC17.2■□□□□ 0.34
CHD8Q9HCK8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.2■□□□□ 0.34
CHD8Q9HCK8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 SLC25A6P5-201ENST00000435663 894 ntBASIC17.19■□□□□ 0.34
CHD8Q9HCK8 RNA5SP421-201ENST00000516864 134 ntBASIC17.19■□□□□ 0.34
CHD8Q9HCK8 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 AL031432.2-201ENST00000566714 459 ntBASIC17.19■□□□□ 0.34
CHD8Q9HCK8 AL928711.1-201ENST00000570165 459 ntBASIC17.19■□□□□ 0.34
CHD8Q9HCK8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 MTDHP4-201ENST00000600287 670 ntBASIC17.19■□□□□ 0.34
CHD8Q9HCK8 AC064836.3-201ENST00000607928 673 ntBASIC17.19■□□□□ 0.34
CHD8Q9HCK8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 AL049796.1-201ENST00000565336 1766 ntBASIC17.19■□□□□ 0.34
CHD8Q9HCK8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 FEM1AP4-201ENST00000443167 1987 ntBASIC17.19■□□□□ 0.34
CHD8Q9HCK8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.19■□□□□ 0.34
CHD8Q9HCK8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms