Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 ECEL1P3-201ENST00000427961 737 ntBASIC16.26■□□□□ 0.19
CDH20Q9HBT6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 SLC25A3P1-201ENST00000443844 931 ntBASIC16.26■□□□□ 0.19
CDH20Q9HBT6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 MIR3180-5-201ENST00000583743 153 ntBASIC16.26■□□□□ 0.19
CDH20Q9HBT6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 FAM87A-204ENST00000613235 858 ntBASIC16.26■□□□□ 0.19
CDH20Q9HBT6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 AC097493.4-201ENST00000641197 219 ntBASIC16.26■□□□□ 0.19
CDH20Q9HBT6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 HEIH-201ENST00000623091 1652 ntBASIC16.26■□□□□ 0.19
CDH20Q9HBT6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 AC006333.2-201ENST00000607957 2099 ntBASIC16.26■□□□□ 0.19
CDH20Q9HBT6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 AP000974.1-201ENST00000623909 2387 ntBASIC16.26■□□□□ 0.19
CDH20Q9HBT6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.26■□□□□ 0.19
CDH20Q9HBT6 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 AL109659.2-201ENST00000606809 1674 ntBASIC16.25■□□□□ 0.19
CDH20Q9HBT6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 MIR4674-201ENST00000582457 87 ntBASIC16.25■□□□□ 0.19
CDH20Q9HBT6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 AC068587.9-201ENST00000641814 219 ntBASIC16.25■□□□□ 0.19
CDH20Q9HBT6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CDH20Q9HBT6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 AL137013.1-201ENST00000432946 1228 ntBASIC16.24■□□□□ 0.19
CDH20Q9HBT6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.24■□□□□ 0.19
CDH20Q9HBT6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms