Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM38AQ9H6F2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
TMEM38AQ9H6F2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM38AQ9H6F2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM38AQ9H6F2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM38AQ9H6F2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM38AQ9H6F2 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM38AQ9H6F2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEM38AQ9H6F2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 AL023284.2-201ENST00000405850 579 ntBASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM38AQ9H6F2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 MCCD1P1-208ENST00000445732 328 ntBASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 DGCR10-201ENST00000609839 495 ntBASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 AC034236.2-201ENST00000606662 1610 ntBASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM38AQ9H6F2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 CD99P1-205ENST00000527459 561 ntBASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms