Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
STRADBQ9C0K7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
STRADBQ9C0K7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
STRADBQ9C0K7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
STRADBQ9C0K7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.63■□□□□ 0.41
STRADBQ9C0K7 AL353692.3-201ENST00000407031 1396 ntBASIC17.63■□□□□ 0.41
STRADBQ9C0K7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.63■□□□□ 0.41
STRADBQ9C0K7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
STRADBQ9C0K7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
STRADBQ9C0K7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.63■□□□□ 0.41
STRADBQ9C0K7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.63■□□□□ 0.41
STRADBQ9C0K7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.63■□□□□ 0.41
STRADBQ9C0K7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
STRADBQ9C0K7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
STRADBQ9C0K7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.63■□□□□ 0.41
STRADBQ9C0K7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.63■□□□□ 0.41
STRADBQ9C0K7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 LINC01521-201ENST00000504184 1943 ntBASIC17.62■□□□□ 0.41
STRADBQ9C0K7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 KRT16P4-201ENST00000453883 522 ntBASIC17.62■□□□□ 0.41
STRADBQ9C0K7 AP002469.2-201ENST00000531724 424 ntBASIC17.62■□□□□ 0.41
STRADBQ9C0K7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
STRADBQ9C0K7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.61■□□□□ 0.41
STRADBQ9C0K7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 IGHV3-47-201ENST00000425060 335 ntBASIC17.61■□□□□ 0.41
STRADBQ9C0K7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 AC079776.4-201ENST00000511039 504 ntBASIC17.61■□□□□ 0.41
STRADBQ9C0K7 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 AC064862.7-201ENST00000604520 867 ntBASIC17.61■□□□□ 0.41
STRADBQ9C0K7 AC068587.9-201ENST00000641814 219 ntBASIC17.61■□□□□ 0.41
STRADBQ9C0K7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 AC141586.3-201ENST00000562166 1838 ntBASIC17.61■□□□□ 0.41
STRADBQ9C0K7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
STRADBQ9C0K7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
STRADBQ9C0K7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
STRADBQ9C0K7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.6■□□□□ 0.41
STRADBQ9C0K7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
STRADBQ9C0K7 AP000347.1-202ENST00000435868 847 ntBASIC17.6■□□□□ 0.41
STRADBQ9C0K7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
STRADBQ9C0K7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.6■□□□□ 0.41
STRADBQ9C0K7 AC106795.1-205ENST00000512851 1056 ntBASIC17.6■□□□□ 0.41
STRADBQ9C0K7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.6■□□□□ 0.41
STRADBQ9C0K7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.6■□□□□ 0.41
STRADBQ9C0K7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
STRADBQ9C0K7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
STRADBQ9C0K7 NSUN5P1-202ENST00000421140 1535 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms